Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1052 ATGTTTCTATTTTTCTGTCTTCTCATTGCTCACTTTAGTGGGGTTGAAAATGCCCACGAGGTGAATGATGGAAGTTCACTGAGAAATTTCATGTCGGGAATTGTTTCAGACCCAGGAAACTCTCTAGCTAGTTGGAGGTCTCCTGGTGTTCATTTTTGTGACTGGTTAGGGATTAAATGTAACAATGTCAGTGGGAAAGTCATAAAGATTCGTCTGAGTAGAAAGTCACTAGGGGGTACAATTTCCCCTGCTCTTGGGAACCTCTCTGCTTTGAAAGTTCTTGATCTTTCTGAGAACTTTTTCGTGGGTCATATCCCAAAAGAGTTGGGATGTTTAGTTCAGCTTGAAAAACTCAGTTTGTATTGGAATCTTCTAGAAGGGAAGATCCCCTCAGAGCTGAGTTCACTTCATAACTTACGCCACCTAGACATGGGAAGTAATAGGCTAAAGGGTGTGATTCCACCTTCATTGTTCTGCAACTCATCATCCTCATTGAAAAATGTAGACCTCTCTAACAATTCATTAGTTGGACAAATCCCCTTGAGTAATGAGTGCGTGCTCTATAAGCTTAGGCATCTTTTAGTTTGGTCTAACCAGCTTGTAGGACAAGTTCCTCCAGCTCTTTCAAACTGTACAGAACTCAGATGGCTTGATTTGGGATTCAACGAGTTGAGTGGTGAGCTACCATCAAAGATTGTTGGTAATTGGCCATATTTACAATATCTTTACCTATCCTCCAATGGTTTTGTTAGCCATAATGGTAACACCAATCTTGAACCATTTTTTACTTCCCTTGTAAATTTGTCTAACCTTCAAGTTCTTGAATTAGATGGAAACTATCTTGGAGGGAAGCTACCTCATATAGTTGGAGGTCTTCCAACATCATTAATGCAGCTTCACCTTGACGAAAATCTCATATATGGTTCAATTCCCCCAGACATTGCCAACCTTGTCAATCTAACTCTATTAAACTTGTCCAGTAACCAACTAAATGGATCAATCCCTCCCAATCTATCCCTGATGAGTAGGCTTGAGAGAGTTTTCTTGTCTAATAATTCTTTATCTGGTGAGATTCCTTCAACCCTTGGTGATATTCAGCATCTGGGTCTGCTAGATTTGTCAAGAAACTGGCTTTCTGGTTCAATACCAGATAATTTTGGCAATCTTTTACAGTTAAGAAGGCTTTTACTTTATCATAACCAGCTTTCTGGAACAATACCACCAAGCCTCGGAAAATGTGTCAATTTGGAGACTCTAGACCTGTCTCGTAACAAGATTTCAGGGGTGATTCCTACTGAAGTTGCAGCCTTAACAAGCTTAAAGCTATACTTGAATTTGTCAAGCAATAACTTAACTGGGCCTCTCCCATTAGAGCTCAGCAAAATGGGCATGGTTCTAGCTATCGATTTATCTAGGAACAACCTCTCTGGTAGAATCCCCCTACAGTTTGAAAGTTGCATAGCACTTGAGTACCTCAACCTTTCGGGTAATTCTTTAGAAGGACCTCTTCCATATTCTTTAGGCCAATTGCCTTACATTCGAGCACTAGATGTGTCTTTGAATCAATTGACTGGGGAAATACCTCAATCTCTGCAGTTATCTTCTACTCTCAAAGAACTTAATTTCTCTTTCAACAAATTCTCAGGGAGCGTATCAATTGAAGGAGCGTTTTCATCTCTCACCATAGACTCTTTCCAAGGAAATGATGGCCTTTGTGGCTCAGTAAAAGGCTTGCATAGCTGCCATAAGAAACATAGCCATCATTTGATTCTCTTGTTAATTCTGGTGCTACTCTTCGTGCTACTCTTTGGCACCCCCATGTTTTGCATGTTTAGGTTCAATTCAGGAGTCCGAAAGAGACTAGCCATTTCTAGCATGTGGAACTTGGAATGTGAAGAGGAAAGAAAAGAGCTCAATTACCCAAGAATTTCACATAAACAACTTGTTGAAGCCACTGGGGGCTTCAATGCTTCAAGCTTGATTGGTTCAGGTCAGTTTGGAAAGGTCTATAAGGGAGTCCTCCAAGACAATACAAGAATAGCGGTGAAAGTATTAAATGTTACCTCTGCTAGTGATATTTCAGGGAGCTTTAAAAGGGAATGTCAGATCCTAAAGAAGACCAGGCACAGAAACTTAATAAGGATCATCAAGATTTGCAGTAAGTCAGAGTTTAAGGCTCTTGTTCTTCCACTAATGCCAAATGGTAGCCTCGAAAGGCATCTATATCCAAGCACTGATTTGAGCCAGAGGTTGGATTTGGTTCAGTTAGTAAGGATCTGCAGTGATGTAGCTGAGGGAATGGCCTATCTCCACCATTACTCTCCAGTTAAAGTGGTGCATTGTGATCTTAAGCCAAGTAATATACTTCTTGATGATGATATGACAGCTTTGGTAACAGATTTTGGAATTTCAAGGCTTGTTAAATGTGATGAGAGCAACCCCTCCAATAACACAACGTCTATCAGTTCAACACAAGGTTTGTTATTGGGTTCTATTGGCTACATAGCCCCCGAGTATGGAATGGGAAAACATGCCTCAACTAAAGGTGATGTCTACAGTATTGGAGTAGTTCTGTTAGAAATTGTGACATGTAGGCCCCCTACTGATGTCCTTATCCATGAAGGATCTAGCTTGCATGATTGGGTTAAGAGACAGTATCCACACAAGCTTGAAGCCATTGTGAAACAAGCATTGCAAAGAACAATCCTTCAATGA 2715 0.4055 MFLFFCLLIAHFSGVENAHEVNDGSSLRNFMSGIVSDPGNSLASWRSPGVHFCDWLGIKCNNVSGKVIKIRLSRKSLGGTISPALGNLSALKVLDLSENFFVGHIPKELGCLVQLEKLSLYWNLLEGKIPSELSSLHNLRHLDMGSNRLKGVIPPSLFCNSSSSLKNVDLSNNSLVGQIPLSNECVLYKLRHLLVWSNQLVGQVPPALSNCTELRWLDLGFNELSGELPSKIVGNWPYLQYLYLSSNGFVSHNGNTNLEPFFTSLVNLSNLQVLELDGNYLGGKLPHIVGGLPTSLMQLHLDENLIYGSIPPDIANLVNLTLLNLSSNQLNGSIPPNLSLMSRLERVFLSNNSLSGEIPSTLGDIQHLGLLDLSRNWLSGSIPDNFGNLLQLRRLLLYHNQLSGTIPPSLGKCVNLETLDLSRNKISGVIPTEVAALTSLKLYLNLSSNNLTGPLPLELSKMGMVLAIDLSRNNLSGRIPLQFESCIALEYLNLSGNSLEGPLPYSLGQLPYIRALDVSLNQLTGEIPQSLQLSSTLKELNFSFNKFSGSVSIEGAFSSLTIDSFQGNDGLCGSVKGLHSCHKKHSHHLILLLILVLLFVLLFGTPMFCMFRFNSGVRKRLAISSMWNLECEEERKELNYPRISHKQLVEATGGFNASSLIGSGQFGKVYKGVLQDNTRIAVKVLNVTSASDISGSFKRECQILKKTRHRNLIRIIKICSKSEFKALVLPLMPNGSLERHLYPSTDLSQRLDLVQLVRICSDVAEGMAYLHHYSPVKVVHCDLKPSNILLDDDMTALVTDFGISRLVKCDESNPSNNTTSISSTQGLLLGSIGYIAPEYGMGKHASTKGDVYSIGVVLLEIVTCRPPTDVLIHEGSSLHDWVKRQYPHKLEAIVKQALQRTILQ 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1052 904 Gene3D Transferase(Phosphotransferase) domain 1 732 904 - -
Prci9g1052 904 ProSitePatterns Serine/Threonine protein kinases active-site signature. 778 790 IPR008271 GO:0004672|GO:0006468
Prci9g1052 904 Pfam Leucine Rich Repeat 489 508 IPR001611 GO:0005515
Prci9g1052 904 Pfam Leucine Rich Repeat 138 157 IPR001611 GO:0005515
Prci9g1052 904 SUPERFAMILY L domain-like 28 252 - -
Prci9g1052 904 FunFam Leucine-rich repeat receptor protein kinase EMS1 261 357 - -
Prci9g1052 904 SUPERFAMILY Protein kinase-like (PK-like) 638 882 IPR011009 -
Prci9g1052 904 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 732 904 - -
Prci9g1052 904 Pfam Leucine rich repeat N-terminal domain 22 61 IPR013210 -
Prci9g1052 904 SUPERFAMILY L domain-like 316 573 - -
Prci9g1052 904 SMART serkin_6 655 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1052 904 SMART LRR_sd22_2 268 294 - -
Prci9g1052 904 SMART LRR_sd22_2 112 135 - -
Prci9g1052 904 SMART LRR_sd22_2 136 170 - -
Prci9g1052 904 SMART LRR_sd22_2 413 434 - -
Prci9g1052 904 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 358 585 - -
Prci9g1052 904 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 58 258 - -
Prci9g1052 904 ProSiteProfiles Protein kinase domain profile. 655 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1052 904 Pfam Leucine Rich repeats (2 copies) 391 427 IPR025875 -
Prci9g1052 904 SMART LRR_typ_2 317 341 IPR003591 -
Prci9g1052 904 SMART LRR_typ_2 136 160 IPR003591 -
Prci9g1052 904 SMART LRR_typ_2 268 292 IPR003591 -
Prci9g1052 904 SMART LRR_typ_2 88 112 IPR003591 -
Prci9g1052 904 SMART LRR_typ_2 365 388 IPR003591 -
Prci9g1052 904 SMART LRR_typ_2 389 413 IPR003591 -
Prci9g1052 904 SMART LRR_typ_2 187 211 IPR003591 -
Prci9g1052 904 ProSitePatterns Protein kinases ATP-binding region signature. 661 683 IPR017441 GO:0005524
Prci9g1052 904 Gene3D Ribonuclease Inhibitor 22 185 IPR032675 -
Prci9g1052 904 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 391 898 - -
Prci9g1052 904 Gene3D Phosphorylase Kinase; domain 1 627 730 - -
Prci9g1052 904 Gene3D Ribonuclease Inhibitor 252 589 IPR032675 -
Prci9g1052 904 Pfam Protein kinase domain 657 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1052 904 ProSiteProfiles Leucine-rich repeat profile. 319 341 IPR001611 GO:0005515
Prci9g1052 904 Gene3D Ribonuclease Inhibitor 186 251 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1052 Prci-Chr9 25151872 25155415 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1052 23 898 Receptor kinase-like Gene Family AT3G47570 34.969 5.57e-153 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci9g1052 Pkinase 3.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1052 - - qsa:O6P43_022222 1199.5