Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1051 ATGTTTCTATTTTTCTGTCTTCTCATTGCTCACTTTAGTGGGGTTGAAAATGCCCACGAGGTGAATGATGGAAGTTCACTGAGAAATTTCATGTCGGGAATTGTTTCAGACCCAGGAAACTCTCTAGCTAGTTGGAGGTCTCCTGGTGTTCATTTTTGTGACTGGTTAGGGATTAAATGTAACAATGTCAGTGGGAAAGTCATAAAGATTCGTCTGAGTAGAAAGTCACTAGGGGGTACAATTTCCCCTGCTCTTGGGAACCTCTCTGCTTTGAAAGTTCTTGATCTTTCTGAGAACTTTTTCGTGGGTCATATCCCAAAAGAGTTGGGATGTTTAGTTCAGCTTGAAAAACTCAGTTTGTATTGGAATCTTCTAGAAGGGAAGATCCCCTCAGAGCTGAGTTCACTTCATAACTTACGCCACCTAGACATGGGAAGTAATAGGCTAAAGGGTGTGATTCCACCTTCATTGTTCTGCAACTCATCATCCTCATTGAAAAATGTAGACCTCTCTAACAATTCATTAGTTGGACAAATCCCCTTGAGTAATGAGTGCGTGCTCTATAAGCTTAGGCATCTTTTAGTTTGGTCTAACCAGCTTGTAGGACAAGTTCCTCCAGCTCTTTCAAACTGTACAGAACTCAGATGGCTTGATTTGGGATTCAACGAGTTGAGTGGTGAGCTACCATCAAAGATTGTTGGTAATTGGCCATATTTACAATATCTTTACCTATCCTCCAATGGTTTTGTTAGCCATAATGGTAACACCAATCTTGAACCATTTTTTACTTCCCTTGTAAATTTGTCTAACCTTCAAGTTCTTGAATTAGATGGAAACTATCTTGGAGGGAAGCTACCTCATATAGTTGGAGGTCTTCCAACATCATTAATGCAGCTTCACCTTGACGAAAATCTCATATATGGTTCAATTCCCCCAGACATTGCCAACCTTGTCAATCTAACTCTATTAAACTTGTCCAGTAACCAACTAAATGGATCAATCCCTCCCAATCTATCCCTGATGAGTAGGCTTGAGAGAGTTTTCTTGTCTAATAATTCTTTATCTGGTGAGATTCCTTCAACCCTTGGTGATATTCAGCATCTGGGTCTGCTAGATTTGTCAAGAAACTGGCTTTCTGGTTCAATACCAGATAATTTTGGCAATCTTTTACAGTTAAGAAGGCTTTTACTTTATCATAACCAGCTTTCTGGAACAATACCACCAAGCCTCGGAAAATGTGTCAATTTGGAGACTCTAGACCTGTCTCGTAACAAGATTTCAGGGGTGATTCCTACTGAAGTTGCAGCCTTAACAAGCTTAAAGCTATACTTGAATTTGTCAAGCAATAACTTAACTGGGCCTCTCCCATTAGAGCTCAGCAAAATGGGCATGGTTCTAGCTATCGATTTATCTAGGAACAACCTCTCTGGTAGAATCCCCCTACAGTTTGAAAGTTGCATAGCACTTGAGTACCTCAACCTTTCGGGGAGCGTATCAATTGAAGGAGCGTTTTCATCTCTCACCATAGACTCTTTCCAAGGAAATGATGGCCTTTGTGGCTCAGTAAAAGGCTTGCATAGCTGCCATAAGAAACATAGCCATCATTTGATTCTCTTGTTAATTCTGGTGCTACTCTTCGTGCTACTCTTTGGCACCCCCATGTTTTGCATGTTTAGGTTCAATTCAGGAGTCCGAAAGAGACTAGCCATTTCTAGCATGTGGAACTTGGAATGTGAAGAGGAAAGAAAAGAGCTCAATTACCCAAGAATTTCACATAAACAACTTGTTGAAGCCACTGGGGGCTTCAATGCTTCAAGCTTGATTGGTTCAGGTCAGTTTGGAAAGGTCTATAAGGGAGTCCTCCAAGACAATACAAGAATAGCGGTGAAAGTATTAAATGTTACCTCTGCTAGTGATATTTCAGGGAGCTTTAAAAGGGAATGTCAGATCCTAAAGAAGACCAGGCACAGAAACTTAATAAGGATCATCAAGATTTGCAGTAAGTCAGAGTTTAAGGCTCTTGTTCTTCCACTAATGCCAAATGGTAGCCTCGAAAGGCATCTATATCCAAGCACTGATTTGAGCCAGAGGTTGGATTTGGTTCAGTTAGTAAGGATCTGCAGTGATGTAGCTGAGGGAATGGCCTATCTCCACCATTACTCTCCAGTTAAAGTGGTGCATTGTGATCTTAAGCCAAGTAATATACTTCTTGATGATGATATGACAGCTTTGGTAACAGATTTTGGAATTTCAAGGCTTGTTAAATGTGATGAGAGCAACCCCTCCAATAACACAACGTCTATCAGTTCAACACAAGGTTTGTTATTGGGTTCTATTGGCTACATAGCCCCCGAGTATGGAATGGGAAAACATGCCTCAACTAAAGGTGATGTCTACAGTATTGGAGTAGTTCTGTTAGAAATTGTGACATGTAGGCCCCCTACTGATGTCCTTATCCATGAAGGATCTAGCTTGCATGATTGGGTTAAGAGACAGTATCCACACAAGCTTGAAGCCATTGTGAAACAAGCATTGCAAAGGTACTTCCCTTTAAGCCTCTCGCCAGTGCAACATAACAAAATCTGGCAAGATGTTATCATGGAACTCATAGAGCTGGGCCTTATTTGCACACAGAACAATCCTTCAATGAGACCAACCATGCTTGATGTAGCTCTAGAGCTTGGCAGGTTGAAAGACTTCTTGTCCAATCCATCACTTCATATGATTGAAGAAGTCACTCACAAGGATGATCCTTTCTATTGTGAAGATAACTTAATAACTAAGCAGCATTGA 2793 0.4085 MFLFFCLLIAHFSGVENAHEVNDGSSLRNFMSGIVSDPGNSLASWRSPGVHFCDWLGIKCNNVSGKVIKIRLSRKSLGGTISPALGNLSALKVLDLSENFFVGHIPKELGCLVQLEKLSLYWNLLEGKIPSELSSLHNLRHLDMGSNRLKGVIPPSLFCNSSSSLKNVDLSNNSLVGQIPLSNECVLYKLRHLLVWSNQLVGQVPPALSNCTELRWLDLGFNELSGELPSKIVGNWPYLQYLYLSSNGFVSHNGNTNLEPFFTSLVNLSNLQVLELDGNYLGGKLPHIVGGLPTSLMQLHLDENLIYGSIPPDIANLVNLTLLNLSSNQLNGSIPPNLSLMSRLERVFLSNNSLSGEIPSTLGDIQHLGLLDLSRNWLSGSIPDNFGNLLQLRRLLLYHNQLSGTIPPSLGKCVNLETLDLSRNKISGVIPTEVAALTSLKLYLNLSSNNLTGPLPLELSKMGMVLAIDLSRNNLSGRIPLQFESCIALEYLNLSGSVSIEGAFSSLTIDSFQGNDGLCGSVKGLHSCHKKHSHHLILLLILVLLFVLLFGTPMFCMFRFNSGVRKRLAISSMWNLECEEERKELNYPRISHKQLVEATGGFNASSLIGSGQFGKVYKGVLQDNTRIAVKVLNVTSASDISGSFKRECQILKKTRHRNLIRIIKICSKSEFKALVLPLMPNGSLERHLYPSTDLSQRLDLVQLVRICSDVAEGMAYLHHYSPVKVVHCDLKPSNILLDDDMTALVTDFGISRLVKCDESNPSNNTTSISSTQGLLLGSIGYIAPEYGMGKHASTKGDVYSIGVVLLEIVTCRPPTDVLIHEGSSLHDWVKRQYPHKLEAIVKQALQRYFPLSLSPVQHNKIWQDVIMELIELGLICTQNNPSMRPTMLDVALELGRLKDFLSNPSLHMIEEVTHKDDPFYCEDNLITKQH 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1051 930 Pfam Leucine Rich repeats (2 copies) 391 427 IPR025875 -
Prci9g1051 930 SUPERFAMILY Protein kinase-like (PK-like) 585 892 IPR011009 -
Prci9g1051 930 SUPERFAMILY L domain-like 265 520 - -
Prci9g1051 930 ProSiteProfiles Protein kinase domain profile. 602 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1051 930 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 255 532 - -
Prci9g1051 930 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 58 254 - -
Prci9g1051 930 ProSitePatterns Protein kinases ATP-binding region signature. 608 630 IPR017441 GO:0005524
Prci9g1051 930 Gene3D Phosphorylase Kinase; domain 1 574 677 - -
Prci9g1051 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 725 737 IPR008271 GO:0004672|GO:0006468
Prci9g1051 930 SMART LRR_sd22_2 268 294 - -
Prci9g1051 930 SMART LRR_sd22_2 112 135 - -
Prci9g1051 930 SMART LRR_sd22_2 136 170 - -
Prci9g1051 930 SMART LRR_sd22_2 413 434 - -
Prci9g1051 930 Gene3D Ribonuclease Inhibitor 251 536 IPR032675 -
Prci9g1051 930 Gene3D Transferase(Phosphotransferase) domain 1 679 913 - -
Prci9g1051 930 SMART LRR_typ_2 317 341 IPR003591 -
Prci9g1051 930 SMART LRR_typ_2 136 160 IPR003591 -
Prci9g1051 930 SMART LRR_typ_2 88 112 IPR003591 -
Prci9g1051 930 SMART LRR_typ_2 268 292 IPR003591 -
Prci9g1051 930 SMART LRR_typ_2 365 388 IPR003591 -
Prci9g1051 930 SMART LRR_typ_2 389 413 IPR003591 -
Prci9g1051 930 SMART LRR_typ_2 187 211 IPR003591 -
Prci9g1051 930 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 679 906 - -
Prci9g1051 930 CDD STKc_IRAK 608 897 - -
Prci9g1051 930 Gene3D Ribonuclease Inhibitor 22 185 IPR032675 -
Prci9g1051 930 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 537 905 - -
Prci9g1051 930 SMART serkin_6 602 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1051 930 Pfam Leucine rich repeat N-terminal domain 22 61 IPR013210 -
Prci9g1051 930 Gene3D Ribonuclease Inhibitor 186 250 IPR032675 -
Prci9g1051 930 ProSiteProfiles Leucine-rich repeat profile. 319 341 IPR001611 GO:0005515
Prci9g1051 930 SUPERFAMILY L domain-like 28 252 - -
Prci9g1051 930 Pfam Leucine Rich Repeat 138 157 IPR001611 GO:0005515
Prci9g1051 930 Pfam Protein kinase domain 604 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1051 Prci-Chr9 25151872 25155664 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1051 23 899 Receptor kinase-like Gene Family AT3G47570 34.585 8.50e-147 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci9g1051 Pkinase 2.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1051 - - bvg:104901734 945.651