Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1050 ATGTTTCTATTTTTCTGTCTTCTCATTGCTCACTTTAGTGGGGTTGAAAATGCCCACGAGGTGAATGATGGAAGTTCACTGAGAAATTTCATGTCGGGAATTGTTTCAGACCCAGGAAACTCTCTAGCTAGTTGGAGGTCTCCTGGTGTTCATTTTTGTGACTGGTTAGGGATTAAATGTAACAATGTCAGTGGGAAAGTCATAAAGATTCGTCTGAGTAGAAAGTCACTAGGGGGTACAATTTCCCCTGCTCTTGGGAACCTCTCTGCTTTGAAAGTTCTTGATCTTTCTGAGAACTTTTTCGTGGGTCATATCCCAAAAGAGTTGGGATGTTTAGTTCAGCTTGAAAAACTCAGTTTGTATTGGAATCTTCTAGAAGGGAAGATCCCCTCAGAGCTGAGTTCACTTCATAACTTACGCCACCTAGACATGGGAAGTAATAGGCTAAAGGGTGTGATTCCACCTTCATTGTTCTGCAACTCATCATCCTCATTGAAAAATGTAGACCTCTCTAACAATTCATTAGTTGGACAAATCCCCTTGAGTAATGAGTGCGTGCTCTATAAGCTTAGGCATCTTTTAGTTTGGTCTAACCAGCTTGTAGGACAAGTTCCTCCAGCTCTTTCAAACTGTACAGAACTCAGATGGCTTGATTTGGGATTCAACGAGTTGAGTGGTGAGCTACCATCAAAGATTGTTGGTAATTGGCCATATTTACAATATCTTTACCTATCCTCCAATGGTTTTGTTAGCCATAATGGTAACACCAATCTTGAACCATTTTTTACTTCCCTTGTAAATTTGTCTAACCTTCAAGTTCTTGAATTAGATGGAAACTATCTTGGAGGGAAGCTACCTCATATAGTTGGAGGTCTTCCAACATCATTAATGCAGCTTCACCTTGACGAAAATCTCATATATGGTTCAATTCCCCCAGACATTGCCAACCTTGTCAATCTAACTCTATTAAACTTGTCCAGTAACCAACTAAATGGATCAATCCCTCCCAATCTATCCCTGATGAGTAGGCTTGAGAGAGTTTTCTTGTCTAATAATTCTTTATCTGGTGAGATTCCTTCAACCCTTGGTGATATTCAGCATCTGGGTCTGCTAGATTTGTCAAGAAACTGGCTTTCTGGTTCAATACCAGATAATTTTGGCAATCTTTTACAGTTAAGAAGGCTTTTACTTTATCATAACCAGCTTTCTGGAACAATACCACCAAGCCTCGGAAAATGTGTCAATTTGGAGACTCTAGACCTGTCTCGTAACAAGATTTCAGGGGTGATTCCTACTGAAGTTGCAGCCTTAACAAGCTTAAAGCTATACTTGAATTTGTCAAGCAATAACTTAACTGGGCCTCTCCCATTAGAGCTCAGCAAAATGGGCATGGTTCTAGCTATCGATTTATCTAGGAACAACCTCTCTGGTAGAATCCCCCTACAGTTTGAAAGTTGCATAGCACTTGAGTACCTCAACCTTTCGGGTAATTCTTTAGAAGGACCTCTTCCATATTCTTTAGGCCAATTGCCTTACATTCGAGCACTAGATGTGTCTTTGAATCAATTGACTGGGGAAATACCTCAATCTCTGCAGTTATCTTCTACTCTCAAAGAACTTAATTTCTCTTTCAACAAATTCTCAGGGAGCGTATCAATTGAAGGAGCGTTTTCATCTCTCACCATAGACTCTTTCCAAGGAAATGATGGCCTTTGTGGCTCAGTAAAAGGCTTGCATAGCTGCCATAAGAAACATAGCCATCATTTGATTCTCTTGTTAATTCTGGTGCTACTCTTCGTGCTACTCTTTGGCACCCCCATGTTTTGCATGTTTAGGTTCAATTCAGGAGTCCGAAAGAGACTAGCCATTTCTAGCATGTGGAACTTGGAATGTGAAGAGGAAAGAAAAGAGCTCAATTACCCAAGAATTTCACATAAACAACTTGTTGAAGCCACTGGGGGCTTCAATGCTTCAAGCTTGATTGGTTCAGGTCAGTTTGGAAAGGTCTATAAGGGAGTCCTCCAAGACAATACAAGAATAGCGGTGAAAGTATTAAATGTTACCTCTGCTAGTGATATTTCAGGGAGCTTTAAAAGGGAATGTCAGATCCTAAAGAAGACCAGGCACAGAAACTTAATAAGGATCATCAAGATTTGCAGTAAGTCAGAGTTTAAGGCTCTTGTTCTTCCACTAATGCCAAATGGTAGCCTCGAAAGGCATCTATATCCAAGCACTGATTTGAGCCAGAGGTTGGATTTGGTTCAGTTAGTAAGGATCTGCAGTGATGTAGCTGAGGGAATGGCCTATCTCCACCATTACTCTCCAGTTAAAGTGGTGCATTGTGATCTTAAGCCAAGTAATATACTTCTTGATGATGATATGACAGCTTTGGTAACAGATTTTGGAATTTCAAGGCTTGTTAAATGTGATGAGAGCAACCCCTCCAATAACACAACGTCTATCAGTTCAACACAAGGTTTGTTATTGGGTTCTATTGGCTACATAGCCCCCGAGTATGGAATGGGAAAACATGCCTCAACTAAAGGTGATGTCTACAGTATTGGAGTAGTTCTGTTAGAAATTGTGACATGTAGGCCCCCTACTGATGTCCTTATCCATGAAGGATCTAGCTTGCATGATTGGGTTAAGAGACAGTATCCACACAAGCTTGAAGCCATTGTGAAACAAGCATTGCAAAGGTACTTCCCTTTAAGCCTCTCGCCAGTGCAACATAACAAAATCTGGCAAGATGTTATCATGGAACTCATAGAGCTGGGCCTTATTTGCACACAGAACAATCCTTCAATGAGACCAACCATGCTTGATGTAGCTCTAGAGCTTGGCAGGTTGAAAGACTTCTTGTCCAATCCATCACTTCATATGATTGAAGAAGTCACTCACAAGGATGATCCTTTCTATTGTGAAGATAACTTAATAACTAAGCAGCATTGA 2952 0.4062 MFLFFCLLIAHFSGVENAHEVNDGSSLRNFMSGIVSDPGNSLASWRSPGVHFCDWLGIKCNNVSGKVIKIRLSRKSLGGTISPALGNLSALKVLDLSENFFVGHIPKELGCLVQLEKLSLYWNLLEGKIPSELSSLHNLRHLDMGSNRLKGVIPPSLFCNSSSSLKNVDLSNNSLVGQIPLSNECVLYKLRHLLVWSNQLVGQVPPALSNCTELRWLDLGFNELSGELPSKIVGNWPYLQYLYLSSNGFVSHNGNTNLEPFFTSLVNLSNLQVLELDGNYLGGKLPHIVGGLPTSLMQLHLDENLIYGSIPPDIANLVNLTLLNLSSNQLNGSIPPNLSLMSRLERVFLSNNSLSGEIPSTLGDIQHLGLLDLSRNWLSGSIPDNFGNLLQLRRLLLYHNQLSGTIPPSLGKCVNLETLDLSRNKISGVIPTEVAALTSLKLYLNLSSNNLTGPLPLELSKMGMVLAIDLSRNNLSGRIPLQFESCIALEYLNLSGNSLEGPLPYSLGQLPYIRALDVSLNQLTGEIPQSLQLSSTLKELNFSFNKFSGSVSIEGAFSSLTIDSFQGNDGLCGSVKGLHSCHKKHSHHLILLLILVLLFVLLFGTPMFCMFRFNSGVRKRLAISSMWNLECEEERKELNYPRISHKQLVEATGGFNASSLIGSGQFGKVYKGVLQDNTRIAVKVLNVTSASDISGSFKRECQILKKTRHRNLIRIIKICSKSEFKALVLPLMPNGSLERHLYPSTDLSQRLDLVQLVRICSDVAEGMAYLHHYSPVKVVHCDLKPSNILLDDDMTALVTDFGISRLVKCDESNPSNNTTSISSTQGLLLGSIGYIAPEYGMGKHASTKGDVYSIGVVLLEIVTCRPPTDVLIHEGSSLHDWVKRQYPHKLEAIVKQALQRYFPLSLSPVQHNKIWQDVIMELIELGLICTQNNPSMRPTMLDVALELGRLKDFLSNPSLHMIEEVTHKDDPFYCEDNLITKQH 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1050 983 CDD STKc_IRAK 661 950 - -
Prci9g1050 983 FunFam Leucine-rich repeat receptor protein kinase EMS1 261 357 - -
Prci9g1050 983 Pfam Leucine Rich Repeat 138 157 IPR001611 GO:0005515
Prci9g1050 983 Pfam Leucine Rich Repeat 489 508 IPR001611 GO:0005515
Prci9g1050 983 ProSitePatterns Serine/Threonine protein kinases active-site signature. 778 790 IPR008271 GO:0004672|GO:0006468
Prci9g1050 983 Gene3D Transferase(Phosphotransferase) domain 1 732 966 - -
Prci9g1050 983 Gene3D Phosphorylase Kinase; domain 1 627 730 - -
Prci9g1050 983 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 58 258 - -
Prci9g1050 983 ProSiteProfiles Protein kinase domain profile. 655 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1050 983 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 732 959 - -
Prci9g1050 983 Pfam Leucine rich repeat N-terminal domain 22 61 IPR013210 -
Prci9g1050 983 SMART LRR_sd22_2 268 294 - -
Prci9g1050 983 SMART LRR_sd22_2 112 135 - -
Prci9g1050 983 SMART LRR_sd22_2 136 170 - -
Prci9g1050 983 SMART LRR_sd22_2 413 434 - -
Prci9g1050 983 Gene3D Ribonuclease Inhibitor 252 589 IPR032675 -
Prci9g1050 983 SMART LRR_typ_2 317 341 IPR003591 -
Prci9g1050 983 SMART LRR_typ_2 136 160 IPR003591 -
Prci9g1050 983 SMART LRR_typ_2 268 292 IPR003591 -
Prci9g1050 983 SMART LRR_typ_2 88 112 IPR003591 -
Prci9g1050 983 SMART LRR_typ_2 365 388 IPR003591 -
Prci9g1050 983 SMART LRR_typ_2 389 413 IPR003591 -
Prci9g1050 983 SMART LRR_typ_2 187 211 IPR003591 -
Prci9g1050 983 SMART serkin_6 655 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1050 983 ProSitePatterns Protein kinases ATP-binding region signature. 661 683 IPR017441 GO:0005524
Prci9g1050 983 SUPERFAMILY L domain-like 316 573 - -
Prci9g1050 983 PANTHER RECEPTOR-LIKE PROTEIN 55 299 948 - -
Prci9g1050 983 SUPERFAMILY L domain-like 28 252 - -
Prci9g1050 983 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 358 585 - -
Prci9g1050 983 Gene3D Ribonuclease Inhibitor 22 183 IPR032675 -
Prci9g1050 983 ProSiteProfiles Leucine-rich repeat profile. 319 341 IPR001611 GO:0005515
Prci9g1050 983 SUPERFAMILY Protein kinase-like (PK-like) 638 945 IPR011009 -
Prci9g1050 983 Gene3D Ribonuclease Inhibitor 184 251 IPR032675 -
Prci9g1050 983 Pfam Protein kinase domain 657 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1050 983 Pfam Leucine Rich repeats (2 copies) 391 427 IPR025875 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1050 Prci-Chr9 25151872 25155664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1050 23 952 Receptor kinase-like Gene Family AT3G47570 34.137 2.36e-153 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci9g1050 Pkinase 3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1050 - - qsa:O6P43_022222 1278.08