Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1037 ATGGGGAAACACAAGAACAGTAACCCTAAGGCAACTAACAGTACCAGTACCAGTACTAGTTGTGTGCAATCTATCACAACGACGAAGAAACGAACCAGAAGAAGTGTCCCCAGAGATTCACCTCTTCAACGCAGCTCAAAATATAGAGGAGTCACTAGACACCGATGGACAGGACGATATGAAGCTCATCTGTGGGACAAGAATTGTTGGAATGAATCGCAGAACAAGAAAGGACGACAAGTGTATCTGGGTGCTTATGATGATGAAGAGGCTGCAGCACATGCTTATGATCTAGCAGCACTGAAGTACTGGGGTCAAGATACCATACTAAACTTTCCGCCATCGACCTATCTCAATGAAATGAAAGAAATGGAGGGTCAATCAAGGGAAGAATATATTGGATCATTAAGAAGGAAAAGCAGTGGCTTTTCTCGTGGAGTTTCTAAGTACAGAGGCGTGGCAAGACATCATCATAATGGAAGATGGGAGGCTCGCATTGGCAGAGTGTTCGGCAACAAATATCTTTATCTTGGGACTTATGCTACCCAAGAAGAAGCTGCCACGGCATATGATATGGCGGCCATTGAATACCGCGGGCTTAATGCTGTCACCAATTTTGACCTAAGTCGTTATATTAAGTGGCTTAAGCCCAATATTAATCACGGCATCAACATGATTAACACTACTAGTAACAGTAATGCTATGCTTAGTGACTCTAAGCCTAACCCTAACTGCGATGCTCGCTTCATCAACCCAAGAAACCCTAACACTCAAGAACATGGATTCAATTACTTCTTCACCAGCCAGCAGGATTCTTCATTCAGCAGTACTGGGGATGAAACCTCCACCAGCTTTGCTCAGTCACGGCAGGCCAAAGCCACCTCGGCCCTCGGCCTCCTGCTTCAGTCGTCCAAGTTTAAGGAGATGACGTCAATGGCCGATTTGTCGGTGGCGGAAACGCCTGCGAAGGCAGAGGAGTCTAGTTTGCCGCCGTGCACTTTTCCGGAGGATATTCAGACGTACTTTGAGTGTGAAGACTGCAATAATGGATATGGAGAAGGAGATTATACAGTGTTCAGTGAGCTCAATTATTCTTTTGTTTCCCCTGCGTTCAACTATCATGACTTTGAGGCATGA 1137 0.4547 MGKHKNSNPKATNSTSTSTSCVQSITTTKKRTRRSVPRDSPLQRSSKYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQVYLGAYDDEEAAAHAYDLAALKYWGQDTILNFPPSTYLNEMKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNINHGINMINTTSNSNAMLSDSKPNPNCDARFINPRNPNTQEHGFNYFFTSQQDSSFSSTGDETSTSFAQSRQAKATSALGLLLQSSKFKEMTSMADLSVAETPAKAEESSLPPCTFPEDIQTYFECEDCNNGYGEGDYTVFSELNYSFVSPAFNYHDFEA 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1037 378 MobiDBLite consensus disorder prediction 1 49 - -
Prci9g1037 378 ProSiteProfiles AP2/ERF domain profile. 149 207 IPR001471 GO:0003700|GO:0006355
Prci9g1037 378 SMART rav1_2 47 119 IPR001471 GO:0003700|GO:0006355
Prci9g1037 378 SMART rav1_2 149 213 IPR001471 GO:0003700|GO:0006355
Prci9g1037 378 FunFam AP2-like ethylene-responsive transcription factor 148 209 - -
Prci9g1037 378 Gene3D AP2/ERF domain 46 114 IPR036955 GO:0003700|GO:0006355
Prci9g1037 378 Gene3D AP2/ERF domain 148 209 IPR036955 GO:0003700|GO:0006355
Prci9g1037 378 ProSiteProfiles AP2/ERF domain profile. 47 113 IPR001471 GO:0003700|GO:0006355
Prci9g1037 378 SUPERFAMILY DNA-binding domain 148 209 IPR016177 GO:0003677
Prci9g1037 378 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Prci9g1037 378 SUPERFAMILY DNA-binding domain 46 115 IPR016177 GO:0003677
Prci9g1037 378 CDD AP2 46 115 IPR001471 GO:0003700|GO:0006355
Prci9g1037 378 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 16 280 - -
Prci9g1037 378 Pfam AP2 domain 46 105 IPR001471 GO:0003700|GO:0006355
Prci9g1037 378 Pfam AP2 domain 148 199 IPR001471 GO:0003700|GO:0006355
Prci9g1037 378 PRINTS Ethylene responsive element binding protein signature 48 59 IPR001471 GO:0003700|GO:0006355
Prci9g1037 378 PRINTS Ethylene responsive element binding protein signature 189 209 IPR001471 GO:0003700|GO:0006355
Prci9g1037 378 CDD AP2 148 209 IPR001471 GO:0003700|GO:0006355
Prci9g1037 378 MobiDBLite consensus disorder prediction 1 30 - -
Prci9g1037 378 FunFam AP2-like ethylene-responsive transcription factor 46 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1037 Prci-Chr9 25070371 25073537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1037 43 211 AP2-EREBP Transcription Factor Family AT5G57390 72.189 4.24e-87 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Prci9g1037 AP2 3.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1037 K09285 - gmx:100795869 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1570 4 13410035 13413697 Prci9g1037 9 25070371 25073537 CCT