Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1035 ATGCCAGATTTAGGAAACTTATCGCTCTCAGAAGCTCTTGAGCTCCCTCACTGCCCTAATCTGAATGTCCCTGCGGAGCCATCTGATCTCACCAGTTCACTGTTCACAGTCCCAGTTAAAACCCTTGGTAATTGTTACATTTCCAACCACACTCTTCTATTCCCGGTTCTTCTGCAGGACGAGGCCCAGAGTGGAAATGAATTCAGGGTTTCAAAGCGGAGCCGTAGTTATTTGGATCGGGGCAATAAGGCAGCCATTGACAAAGGTTCAGAAGATCACGTGAAAGATTGGTCTGAGAAGAAAATAGATTCCGGGTTTTGCAGACTCAGCTGCACTCTTCCGTTTCTTGTCGGTGCTCCGAAGATGGCTGAATGTTTTTATTGCCATTATTTTGTCTACCCCGGGAAGGAGGTTATATGTTCTGTCCGAGGCTGTGAAAGAGTTTACCATGTGGAATGTGCAAAAGAAGCTGGTGGAATCTCAAATCCCAAAAAATTCAAGTGCCCACATCATGCTTGCTTTATTTGCAAACAAAAATTACACTTGCGGTGTGAGCGGTGCACAATGGCGTTTCATGCTAAATGCGCACCGTGGCCAGATGCTGTAATGCTGTCAAAGGATCATCCTGGACGAGCTGTTTGTTGGAGGCATCCTACTGATTGGCGGTTGGATAGAAAGCATGAAGCTTCAACAAGTGACATGGAGGAAGTGTTTTGCCGTTTGCCTCTTCCTTATGTCAATGAGGAGTTCAAGATTGATTTCACGTGGAAAGACATGGAGAGTAAACTTGAACCCCCTCCATATGTACACATAAGACGCAATATATACCTCGTCAAGAAGAAGCGCAGTGATTGTGTCAAAAAAAAGAAGAAGCGCAGTGATTCAGATGATGGCGCAGGGTGCACCAGTTGCACTTCTAATTCTACGTGTTCTGATGATTGCGTTTGCAGAGTTCAATGCATAAGCTGCTCTAAGGCTTGCCGCTGCTCAGAAAATTGCAATAATCGGCCATTTCGCAAGGAGAAAAAGATCAAGATTGTCAAGACTGAACTTTGTGGCTGGGGAGTAGAGGCCGCTGAAATCATCAATAAAGGCGAATTTATAATTGAATATATTGGAGAAGTAATAGATGATGCTTTATGTGAAAAAAGGCTGTGGGACATGAAACATAAAGGTGAACAAAATTTTTATATGTGTGAGATCCGGAAAGATTTCACAATAGATGCAACTTTCAAAGGAAATACATCACGCTTCTTAAACCATAGTTGTGATCCCAACTGTGTTTTGGAGAAGTGGCAAGTTGATGGTGAAACACGCGTCGGTGTCTTTGCTGCTCGCTCAATCGAAGTCGGAGAACCGTTAACATACGATTACAGATTTGTGCAATTTGGACCAGAGGTAAAGTGCCACTGTGGTGCCCCAAACTGTCAAGGCTTTCTAGGGACCAAAAAGAAGATTGACAAGGTGAACCTTTGCTGTGGCTGGGGCTCAAAACGGAAGAGAACTTATATTACAATGGGGACCAAAAAGGGAACTTCACCTGCTTGCATTGCTATAATAACAGCCCCAAAGTGA 1575 0.44 MPDLGNLSLSEALELPHCPNLNVPAEPSDLTSSLFTVPVKTLGNCYISNHTLLFPVLLQDEAQSGNEFRVSKRSRSYLDRGNKAAIDKGSEDHVKDWSEKKIDSGFCRLSCTLPFLVGAPKMAECFYCHYFVYPGKEVICSVRGCERVYHVECAKEAGGISNPKKFKCPHHACFICKQKLHLRCERCTMAFHAKCAPWPDAVMLSKDHPGRAVCWRHPTDWRLDRKHEASTSDMEEVFCRLPLPYVNEEFKIDFTWKDMESKLEPPPYVHIRRNIYLVKKKRSDCVKKKKKRSDSDDGAGCTSCTSNSTCSDDCVCRVQCISCSKACRCSENCNNRPFRKEKKIKIVKTELCGWGVEAAEIINKGEFIIEYIGEVIDDALCEKRLWDMKHKGEQNFYMCEIRKDFTIDATFKGNTSRFLNHSCDPNCVLEKWQVDGETRVGVFAARSIEVGEPLTYDYRFVQFGPEVKCHCGAPNCQGFLGTKKKIDKVNLCCGWGSKRKRTYITMGTKKGTSPACIAIITAPK 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1035 524 FunFam Histone-lysine N-methyltransferase 245 492 - -
Prci9g1035 524 ProSiteProfiles Post-SET domain profile. 465 481 IPR003616 -
Prci9g1035 524 ProSiteProfiles AWS domain profile. 297 342 IPR006560 GO:0005634|GO:0042054
Prci9g1035 524 Pfam SET domain 353 458 IPR001214 GO:0005515
Prci9g1035 524 SUPERFAMILY SET domain 257 478 IPR046341 -
Prci9g1035 524 SMART set_7 342 465 IPR001214 GO:0005515
Prci9g1035 524 CDD SET_ASHR3-like 343 481 - -
Prci9g1035 524 ProSiteProfiles SET domain profile. 342 459 IPR001214 GO:0005515
Prci9g1035 524 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 221 IPR013083 -
Prci9g1035 524 PANTHER SET DOMAIN PROTEINS 88 501 - -
Prci9g1035 524 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 514 IPR025787 -
Prci9g1035 524 SMART PHD_3 124 172 IPR001965 -
Prci9g1035 524 SMART PHD_3 173 218 IPR001965 -
Prci9g1035 524 Gene3D SET domain 246 491 IPR046341 -
Prci9g1035 524 SMART PostSET_3 465 481 IPR003616 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1035 Prci-Chr9 25050853 25056300 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1035 323 480 C2H2 Transcription Factor Family AT2G23740 36.313 3.77e-24 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci9g1035 SET 5.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1035 - - qsa:O6P43_022233 786.563