Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1032 ATGGCTTCTCCTTGGTTTTATCTTCTCTTCTTTTTCTCTTGTTCTGGACTCTGTTTCTCTTACGAGCCTCGCAACCACGAAGTGGAAGCATTGATAAGCATAAGAGCATCTCTGAGTGATCCACATGGGGTATTAAGCAACTGGGATGAATACTCAGTAGACCCTTGTAGTTGGGCTATGATCACTTGCTCTTCTGATTCCCTTGTTGTAGGCTTTGGAGCTCCAAGTCAATCTCTTTCTGGAACCTTATCTTCTGCCATAGGAAATCTGACAAATCTTCGACAAGTGTTACTGCAGAACAACAATGTATCCGGCCAAATCCCGCCGGAACTTGGTACCCTTTCTAAGCTACAGACTTTAGATCTTTCCAATAATCGATTCTCTGGTGTGATTCCCGGTTCTTTAAGTCACTTGGATAATCTTCAGTATTTGAGGCTGAACAACAACACCTTATCTGGGCCCTTTCCTGTGTCACTAGCCAGCATCCCTCAACTTGCTTTCCTAGACTTGTCTTATAACAATCTCAGTGGACCCGTACCGAAGTTTCCAGCTAGATCACTCAATGTTGTGGGGAACCCATTGATTTGTGGAAGAAGCTCTACTGAAGGTTGCTCAGGAACTACAACCCTCTTGCCTGTTTCATTTTCTCTTCCATCCTCACAAGGGAAGCACAAGTCCAAGAAAATAGCAATTGCACTTGGGATCAGCCTTAGCTTTGCTTTTCTCATACTGCTGTCTCTAGGGTTCTTCTGGCATATAAAGAAAAGACAGCACCGGGCGCTTCTGTATGTCAGTGATTATCAAGAAGATGGGCTTGTTCACTTGGGGAATCTCAACATTTTCACTTTCAGAGAGCTTCAACATGCAACAGATAATTTCAGCTCCAAGAACATTCTTGGTGCTGGAGGTTTTGGCAATGTTTATAGGGGAAAGCTTGGAGATGGGACACTGGTTGCTGTGAAGAGGCTGAAAGATATCACTGGAAGTGCTGGGGAATCGCAGTTTCGAACTGAATTAGAGATGATCAGTTTGGCAGTTCACCGCAATTTACTTCGCTTAGTTGGATTTTGTGCTACTTCTAATGAGAAGCTTCTGGTTTATCCTTTCATGTCTAATGGAAGTGTGGCATCCAGACTTAGAGGCAAACCTGCTCTAGATTGGAACACAAGAAAGAGGATAGCGATCGGAGCTGCCAGAGGTCTTCTGTATCTGCATGAGCAATGTGATCCAAAGATAATACATAGAGATGTTAAGGCTGCTAATGTGCTTCTGGATGAGTACTATGAAGCTGTTGTTGGTGATTTTGGCCTTGCAAAGCTCCTTGATCATGCTGACTCTCATGTTACTACTGCTGTTCGTGGCACGGTAGGCCACATTGCACCAGAGTACCTCTCCACCGGCCAATCATCTGAGAAAACTGATGTATATGGATTTGGCATTCTCTTATTGGAGCTCATAACTGGAATGACGGCTCTTGAGTTTGGAAAAACAGTGAATCAGAAAGGTGCAATGCTAGAGTGGGTGAAGAAAATACAGCAAGAAAAGAAGGTGGAAGTGTTGGTGGACAAGGAGTTAGGAAGAAACTATGACAGGATAGATGTGGGAGAGATGTTGCAAGTAGCTTTACTTTGCACTCAGAGTCTACCGGTCCACCGCCCCAAAATGTCAGAAGTGGTCAGAATGCTCGAAGGTGATGGCCTTGCCGACAAGTGGGCAGCTTCACAAAATCATGACAACCTCAACATGAACACCACCTTTCACAGCCACAGTAACAATAGTTCATCTTCTCGCCCAAGCACCACTCTTTCTTCAAAATTTGATGATGATGATGATGATGATGATGCTCATGATCGTCGTCCCAGCATGTTTGGCATGGGACTGGATGCTGATGATGATGATGAACACTCTTTGGATTCCTATGCCATGGAACTCTCTGGTCCTAGTCGTACATCTCCATGA 1959 0.4441 MASPWFYLLFFFSCSGLCFSYEPRNHEVEALISIRASLSDPHGVLSNWDEYSVDPCSWAMITCSSDSLVVGFGAPSQSLSGTLSSAIGNLTNLRQVLLQNNNVSGQIPPELGTLSKLQTLDLSNNRFSGVIPGSLSHLDNLQYLRLNNNTLSGPFPVSLASIPQLAFLDLSYNNLSGPVPKFPARSLNVVGNPLICGRSSTEGCSGTTTLLPVSFSLPSSQGKHKSKKIAIALGISLSFAFLILLSLGFFWHIKKRQHRALLYVSDYQEDGLVHLGNLNIFTFRELQHATDNFSSKNILGAGGFGNVYRGKLGDGTLVAVKRLKDITGSAGESQFRTELEMISLAVHRNLLRLVGFCATSNEKLLVYPFMSNGSVASRLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDEYYEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVYGFGILLLELITGMTALEFGKTVNQKGAMLEWVKKIQQEKKVEVLVDKELGRNYDRIDVGEMLQVALLCTQSLPVHRPKMSEVVRMLEGDGLADKWAASQNHDNLNMNTTFHSHSNNSSSSRPSTTLSSKFDDDDDDDDAHDRRPSMFGMGLDADDDDEHSLDSYAMELSGPSRTSP 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1032 652 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Prci9g1032 652 Gene3D Ribonuclease Inhibitor 24 206 IPR032675 -
Prci9g1032 652 SMART LRR_typ_2 138 169 IPR003591 -
Prci9g1032 652 SMART LRR_typ_2 114 137 IPR003591 -
Prci9g1032 652 Gene3D Phosphorylase Kinase; domain 1 263 369 - -
Prci9g1032 652 ProSitePatterns Protein kinases ATP-binding region signature. 299 321 IPR017441 GO:0005524
Prci9g1032 652 ProSiteProfiles Protein kinase domain profile. 293 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1032 652 FunFam Putative LRR receptor-like serine/threonine-protein kinase 24 206 - -
Prci9g1032 652 MobiDBLite consensus disorder prediction 615 630 - -
Prci9g1032 652 Pfam Protein tyrosine and serine/threonine kinase 296 562 IPR001245 GO:0004672|GO:0006468
Prci9g1032 652 Pfam Leucine rich repeat 116 175 IPR001611 GO:0005515
Prci9g1032 652 FunFam Somatic embryogenesis receptor-like kinase 1 370 582 - -
Prci9g1032 652 Gene3D Transferase(Phosphotransferase) domain 1 370 582 - -
Prci9g1032 652 SUPERFAMILY Protein kinase-like (PK-like) 275 563 IPR011009 -
Prci9g1032 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Prci9g1032 652 MobiDBLite consensus disorder prediction 582 602 - -
Prci9g1032 652 PRINTS Leucine-rich repeat signature 117 130 - -
Prci9g1032 652 PRINTS Leucine-rich repeat signature 162 175 - -
Prci9g1032 652 MobiDBLite consensus disorder prediction 582 652 - -
Prci9g1032 652 FunFam Somatic embryogenesis receptor kinase 1 262 369 - -
Prci9g1032 652 SUPERFAMILY L domain-like 25 195 - -
Prci9g1032 652 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 7 573 - -
Prci9g1032 652 SMART serkin_6 293 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1032 Prci-Chr9 25024919 25030374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1032 8 508 Receptor kinase-like Gene Family AT2G23950 76.048 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Prci9g1032 PK_Tyr_Ser-Thr 2.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1032 - - csav:115725328 962.985