Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1014 AATGGGCAGAAGCAGAACCTTGTTAGGAGTGAAAGGAGCCAACTTTTTGTCTCCCTCACAACCCCCACCATATTGCTTGCGCCTCCCAACGTTGTTGGATCTGAAGATTCCAACGTAAAAGACAGCGTCAGCCCCAGTGTACTCCTCATCATCATCATCCTCGCCATCGTCTTCTTCCTCTCTGGTTTGCTCCACCTTCTTGTTCGGTATCTATGGAGGCCCCAGACCAGAGACCCGGACGATCCGGACGACGTTACTGTTCTTCAGGGACAGCTTCAGCAACTGTTCCACCTCCACGATTCCGGGGTCGACCAATCCTTCATTGACACCCTCCCTGTCTTCCTCTACAAGGCCATCATCGGACTCAAGAACCCTTTCGATTGCGCCATTTGTTTGTCCGAATTCGAGCCGGAGGACAAGCTCCGATTGTTGCCCAAATGCAGCCACGCGTTCCATATGGAGTGTATCGACACGTGGCTCTTGTCTCACTCGACCTGCCCTATCTGTCGAGCCTGCTTGCTCAATGACTTCTCCTCTGGCAACACATGTTCCCCCATTGTTCTGGTCCTTGAATCTGGGAGTGACAACTCCTCCAGAGAGATTGCCCCAGAAACCGACGAAATCGGATCCAGGTCGACCCGCTTGGACTCGAATCACGATTCGGGTGAAGTGGTCACCGTGAAGCTGGGAAAGATCAGGAACGTCGATGATAACAATGGTGAAGGTAGTAGCACGGACAATAACGCAGATGCAAGAAGGTGTTTCTCTATGGGGTCGTTTGCTTATGTGATGGACGAGAGTTGTTCGCTTCAGGTACCCATTAGAGCACGAATCAAGAAGAGGCATGTTTTGCGTTTCACTCCAGGTCACAGACTTGCAATGTCAGAGTGTGACTTAGAATCCAGAAGGGATTTCAGATTCTCTAGTTTAGATGGGAACAGAGTTGAAGAAACTGCGAATCCAAGATCCGGGGCTATTACCAGAAAAGAGAGCTTCTCGGTGTCGAAGATTTGGCTCCGGGAGAAGAAACGGAAGAGGAATGGGATTGAGGATTCGTCGAGGAGGGCCATGTCGTTCCGGTTTCCGTTGCAGAGAAACGACGACGACGACGACGCTTTGAAGGAGAAGAATGGGAAATTAGAATCGAGAAGCACGATTTCTGAGATGGATATCACAAAATGGGAAAATGGAGGAGGAGGGAGTGAATTTGGATATGATGATGAAAACCAGAGCTGTTACAGTGTAGATTCGCAGGCGATTAGAGCTCCTTCTTTTGCAAGAAGAACTCTGCTTTGGCTCACCGGAAGACAGGGCAAGGTTGTTCATTCATCCCCTGCTTCCGGCGAGTTGTAG 1353 0.5011 NGQKQNLVRSERSQLFVSLTTPTILLAPPNVVGSEDSNVKDSVSPSVLLIIIILAIVFFLSGLLHLLVRYLWRPQTRDPDDPDDVTVLQGQLQQLFHLHDSGVDQSFIDTLPVFLYKAIIGLKNPFDCAICLSEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPICRACLLNDFSSGNTCSPIVLVLESGSDNSSREIAPETDEIGSRSTRLDSNHDSGEVVTVKLGKIRNVDDNNGEGSSTDNNADARRCFSMGSFAYVMDESCSLQVPIRARIKKRHVLRFTPGHRLAMSECDLESRRDFRFSSLDGNRVEETANPRSGAITRKESFSVSKIWLREKKRKRNGIEDSSRRAMSFRFPLQRNDDDDDALKEKNGKLESRSTISEMDITKWENGGGGSEFGYDDENQSCYSVDSQAIRAPSFARRTLLWLTGRQGKVVHSSPASGEL 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1014 450 FunFam RING-H2 finger protein ATL46 90 175 - -
Prci9g1014 450 CDD RING-H2_EL5-like 127 170 - -
Prci9g1014 450 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 41 338 - -
Prci9g1014 450 SMART ring_2 128 169 IPR001841 -
Prci9g1014 450 Pfam Ring finger domain 127 170 IPR001841 -
Prci9g1014 450 ProSiteProfiles Zinc finger RING-type profile. 128 170 IPR001841 -
Prci9g1014 450 MobiDBLite consensus disorder prediction 197 218 - -
Prci9g1014 450 SUPERFAMILY RING/U-box 107 176 - -
Prci9g1014 450 MobiDBLite consensus disorder prediction 200 218 - -
Prci9g1014 450 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 102 177 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1014 Prci-Chr9 24875937 24877461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1014 37 447 C3H Transcription Factor Family AT2G18650 43.430 1.45e-90 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1014 - - pcin:129319707 872.078