Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1011 ATGTGGCGCCTAGTTCACGAGTATTTGGCAGGGGGGAACTTGTCACGGACCCAAGAAAAATTGCAGGAGAGAGATATCAGATCCGATTTCTTCATTGATTTTATTGCTACTCTGCCTCTTCCCCAGATGCTCATTTGGTTTATTATACCAGCAACAAGAAGCCCTCTTGCTGATCAGAATAATAATGCTCTGGCATTGATTGTTCTGCTCCAATATGTTCCAAGGTTATATTTGATCTTTCCACTAAGTTCAGAAATAATCAAAGCAACTGGAGTGGTTACCAAGACTGCATGGGCAGGAGCCGCATATAATCTGCTGTTGTATATGCTGGCCAGTCATGTTTCGGGAGCAGCATGGTATCTTCTATCAGTGGACCGGTATACCTATTGTTGGAAATCTTTTTGCAAAAAGGAATTTAGTCCTAAAGATTGCTTTCTTTACCTGGACTGTGATTCTCTTAACCTTGAGCACCGCAACATATGGGCAAAGAATACAAGTGTGTTTAACAACTGCAATCCCAGAAACAATGATTTTGAGTTTGGCATATTCGAATCTGCAGTGTCAAAACATGTTGTCTCCACAAACTTCATCTCAAAGTACTTCTATTGTTTATGGTGGGGTTTGCAGCAACTCAGTTCTTATGGGCAGAACTTGGAGACGAGCACTTTTATGGGCGAGACATCATTTTCTATTCTGATTGCCATCCTGGGTCTTGTGCTGTTTTCCCATTTGATTGGGAACATGCAGACATATTTGCAATCAACCACCATAAGGCTCGAGGAGTGGAGGCTCAAGCGAAGAGACACTGAAGAGTGGATGAGACATCGCCAGCTCCCTGAAGATTTGAGACGACGTGTTCGACGATTTGTTCAGTACAAGTGGCTTGCAACTCGAGGAGTTGATGAAGAAACAATTCTACGTGGATTACCTGCTGATCTTCGCCGTGATATCCAACGCCACCTATTCTTAGACCTTGTTCGACGAGTTCCCTTCTTCTCACAGATGGATGATCAACTACTAGACGCAATATGTGAGCGGCTGGAGTCCTTTTTGAGCACTCAAGGCACCTTCATTGTTCGGGAGGGAGACCCTGTGACAGAAATGCTCTTTATCGTCAGAGGTAGATTAGATAGTTCTACTACAAATGGTGGTCGGAGTGGATTCTTCAATTCAATCATATTGAGACCTGGAGATTTTTGTGGTGAGGAACTACTTGCTTGGGCCCTGCTTCCAAAATCGACCGTGAACCTGCCTTCTTCAACCAGGACCCTTAAATCACTTACTGAGGTTGAAGCTTTTGCTCTTCGAGCTGAAGATCTCAAGTTTGTGGCGAATCAATTTAGGCGCCTCCACAGCAAGAAGCTGCAGCACACCTTCCGGTTTTATTCCCATCATTGGAGGACTTGGGCAGCCTGCTTCATACAGGCTGCATGGCATCGATATAAGAAAAGGATGTCTGCCAAAGATCTTGCTTTCAGGGAATCCTTCACCATGGATGAGAATGTGGCCGATGAGAGAGAACCTGAGGATGAATGTCCTGCCGATTCAGATTCTTCTCGGGCTAAATTGAACCTTGGCGTCACATTACTTGCGTCAAGGTTTGCTGCAAACACAAGAAGGGGAGCTCTAAAGATTAAAGATGACATGCCAAAATTGCAAAAACCTGAAGAACCTGACTTTACTGTTGAAGCTGATGATGACTAG 1704 0.4431 MWRLVHEYLAGGNLSRTQEKLQERDIRSDFFIDFIATLPLPQMLIWFIIPATRSPLADQNNNALALIVLLQYVPRLYLIFPLSSEIIKATGVVTKTAWAGAAYNLLLYMLASHVSGAAWYLLSVDRYTYCWKSFCKKEFSPKDCFLYLDCDSLNLEHRNIWAKNTSVFNNCNPRNNDFEFGIFESAVSKHVVSTNFISKYFYCLWWGLQQLSSYGQNLETSTFMGETSFSILIAILGLVLFSHLIGNMQTYLQSTTIRLEEWRLKRRDTEEWMRHRQLPEDLRRRVRRFVQYKWLATRGVDEETILRGLPADLRRDIQRHLFLDLVRRVPFFSQMDDQLLDAICERLESFLSTQGTFIVREGDPVTEMLFIVRGRLDSSTTNGGRSGFFNSIILRPGDFCGEELLAWALLPKSTVNLPSSTRTLKSLTEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWHRYKKRMSAKDLAFRESFTMDENVADEREPEDECPADSDSSRAKLNLGVTLLASRFAANTRRGALKIKDDMPKLQKPEEPDFTVEADDD 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1011 567 CDD CAP_ED 331 462 IPR000595 -
Prci9g1011 567 FunFam Cyclic nucleotide-gated ion channel 1 258 322 - -
Prci9g1011 567 Pfam Ion transport protein 27 257 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci9g1011 567 SUPERFAMILY cAMP-binding domain-like 261 453 IPR018490 -
Prci9g1011 567 Gene3D Helix hairpin bin 259 321 - -
Prci9g1011 567 FunFam Cyclic nucleotide-gated ion channel 1 329 447 - -
Prci9g1011 567 ProSiteProfiles cAMP/cGMP binding motif profile. 331 414 IPR000595 -
Prci9g1011 567 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 12 560 - -
Prci9g1011 567 Gene3D Jelly Rolls 329 449 IPR014710 -
Prci9g1011 567 SUPERFAMILY Voltage-gated potassium channels 25 253 - -
Prci9g1011 567 Gene3D - 6 255 - -
Prci9g1011 567 SMART cnmp_10 331 462 IPR000595 -
Prci9g1011 567 MobiDBLite consensus disorder prediction 546 567 - -
Prci9g1011 567 Pfam Cyclic nucleotide-binding domain 354 442 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1011 Prci-Chr9 24830396 24835390 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1011 12 566 Ion Channels AT4G30360 71.429 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1011 K05391 - gmx:100808425 952.199