Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0999 ATGTGGTTGATACTAACATTTATATTAATGCAAAGTTACACAGCATGCTTGTCATCAATCATGGTAGTACATCAATTGCAACCTAGTTACCCAAGTGAGTATGACGTTAGAATGGACCCCAAAATCAAAGTTGGATACCACCGTGACTCATTTGTTGGCAGCTTATTGGTAGATCGCTTGAAGTACGATAGGTTGAGAGTGAAGAACTACCCTGACATGGAAGAATATAAGGAGGCTCTAGACAAAGGAAGCAATAAAGGTGGTGTTGATGCTATTTTTGATCATGTTTCCCACATCAAGATCTTCCTCAATCAATATGGATCCAAGTATGTCATGGTTGAAACTGGACTTCGCACAGATGGATTTGCTTTTGCATTCCCCAAAGGTTCCAATTTGACATCGTACTTTTCTAGAGCCATATTAAATGTGAGAGAGAGTGAAGAAATGGACAAGATTGAGGAGAAATATTTTGGAAGTAGCGATGACAATGAAGACCAAGGCCTATCTAATTCATCGTCAAACGAAGTGAGTTCCAGCCTCACCACTTATAGTTTTGCAGGTTTGTTCATTGTAATTGTAATTCTTTCGCTGTTAGCTTTGCTAGTCTCTGAAAGTCACCTTTGGCAAAAACCTGTTATGCTTGCAAAAACGTATAGTCGACAATTTTTGTGTAGAAGTTTTTCAAGAACGAGTCTAGTAGAAGGTTCAACAACAAAAGAAAATGTTGATGAAAAAGGTTTTACAACCAGCTGA 753 0.3825 MWLILTFILMQSYTACLSSIMVVHQLQPSYPSEYDVRMDPKIKVGYHRDSFVGSLLVDRLKYDRLRVKNYPDMEEYKEALDKGSNKGGVDAIFDHVSHIKIFLNQYGSKYVMVETGLRTDGFAFAFPKGSNLTSYFSRAILNVRESEEMDKIEEKYFGSSDDNEDQGLSNSSSNEVSSSLTTYSFAGLFIVIVILSLLALLVSESHLWQKPVMLAKTYSRQFLCRSFSRTSLVEGSTTKENVDEKGFTTS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0999 250 MobiDBLite consensus disorder prediction 162 176 - -
Prci9g0999 250 Pfam Ligand-gated ion channel 1 194 IPR001320 GO:0015276|GO:0016020
Prci9g0999 250 Pfam Bacterial extracellular solute-binding proteins, family 3 43 158 IPR001638 -
Prci9g0999 250 SUPERFAMILY Periplasmic binding protein-like II 12 159 - -
Prci9g0999 250 SMART GluR_14 1 159 IPR001320 GO:0015276|GO:0016020
Prci9g0999 250 MobiDBLite consensus disorder prediction 157 176 - -
Prci9g0999 250 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 210 IPR015683 -
Prci9g0999 250 Gene3D - 37 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0999 Prci-Chr9 24712755 24716580 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0999 1 202 Ion Channels AT5G11210 36.139 5.60e-37 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0999 K05387 - pcin:129319408 477.633