Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0998 ATGGGGCTTCTGACTGGAAGCTTCTCTGCAGACCGTAGAAGAGGAGAAAAGGAGAAGGAAGTCGAAGATGGATTCAGTCGAGCTGAAATTGGAGCAGGCGATGATGCTGCTGGTTCACTCCTAGGAGGGAAGAAGTTGATAATTGGACTTCCAAAGAAAACAGGCTTCACCCAATTCGTGGATGTGCAACTCAATACCACCAATGTGAATCAGATAGTCAAGGTTTCGGGCTATTCCATTGACGTCTTCCATGCTGCAATAACTTATCTTGAGAGTTTACGTTACAATATTTCTTTCGAGTTTAGAGCTTTTGTGGACGAAGATGGAAACAGTGCTGGGAATTACGATGAACTCGTCTATCAGGTTTTTGAAGGAAAGTATGACGCTGTGGTAGGGGATGTGTCGATTCTGGCATATCGATCAAACTATGTTGATTTTACATTACCATATGCACCATCTGATGTGAAGATGCTTGTGAAGGTTCGTCATGATCCACGGTTGAATATGTGGGTTTTTGTACGACCTTTTAGTTGGGATCTATGGTTGTCTATTACCATCTTCAGTGTTTTTATTGGAGCTATCATAACGTTAATGGAACGTACTGTCAAGGAAGATTCAGCATGTAAAAATTCACCATACAAGAAACAACTCAGTGGGGTTTCTATCTTGTGGCTTCCAGTTGAACAAGCAGTTCTTCCTGAAAGAGAAGCATTGGTCAAAAATTGTTCTAGGTTTGTGCTGGTGATGTGGTTGATACTCGCATTCATGCTAATGCAAAGTTACACAGCAAGCTTGTCATCAATATTGACAATAAATCAGCTCCAACCTCGTTACGTCAGTGAGCATGACGTCATAATAGACCCCAACATTAATGTTGGATACCATCGTTACTCATTTGTTGAAGGTTTATTAGTCGATCGCTTGAGGATTGATAGGTCCAGGGTGAAGAACTACCCTGACATTAAAGAATATAGGGAGGCTTTGGACAAAGGAAGCCGTAAAGGTGGCGTCGACGCTATTTTTGATCATATTTCCCACATTAAAATCTTCCTCAAGCAGTATGGTTCCAATTATGCCATGGTCGAAACTAGACATCGCATTGATGGATTTGCTTTTGCATTTCCCATGGGCTCCAACTTAACTGCGTATTTTTCTAGAGCTATATTAAATGTAAGAGAGAGTGAAGAAATGGACAAGATTGAGCAAAAATATTTTGGAAGGAATCATGAGGACTATGAAGGCCAAGGCTTATCTACTTCATCATCACCAGATGATGCGAGTTCCAGCCTTACCACTTATAGCTTTGCAGGATTGTTCATGGCAATTGGAATTCTTTCACTTTTAGCTTTGACAGTCTCTGAAAGCCATATTTGGCAAAAGCCTGTTATGCTTGCAAATTCGTATAGCAGACGATTGCTAATAAGTTGGAATTTTGCAAGAACTAGTCCATTAGAGGGAGGTTCTGCAGCAAGAAGAAATGTTGATGGAGAAGGTTTAACAACCAGAGAAAGTAATCAAAATATTGGATTGGAAGTGGAGAATATATAA 1548 0.405 MGLLTGSFSADRRRGEKEKEVEDGFSRAEIGAGDDAAGSLLGGKKLIIGLPKKTGFTQFVDVQLNTTNVNQIVKVSGYSIDVFHAAITYLESLRYNISFEFRAFVDEDGNSAGNYDELVYQVFEGKYDAVVGDVSILAYRSNYVDFTLPYAPSDVKMLVKVRHDPRLNMWVFVRPFSWDLWLSITIFSVFIGAIITLMERTVKEDSACKNSPYKKQLSGVSILWLPVEQAVLPEREALVKNCSRFVLVMWLILAFMLMQSYTASLSSILTINQLQPRYVSEHDVIIDPNINVGYHRYSFVEGLLVDRLRIDRSRVKNYPDIKEYREALDKGSRKGGVDAIFDHISHIKIFLKQYGSNYAMVETRHRIDGFAFAFPMGSNLTAYFSRAILNVRESEEMDKIEQKYFGRNHEDYEGQGLSTSSSPDDASSSLTTYSFAGLFMAIGILSLLALTVSESHIWQKPVMLANSYSRRLLISWNFARTSPLEGGSAARRNVDGEGLTTRESNQNIGLEVENI 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0998 515 Gene3D - 370 405 - -
Prci9g0998 515 Gene3D - 312 369 - -
Prci9g0998 515 CDD GluR_Plant 44 405 - -
Prci9g0998 515 MobiDBLite consensus disorder prediction 10 24 - -
Prci9g0998 515 FunFam Glutamate receptor 42 166 - -
Prci9g0998 515 Gene3D - 169 294 - -
Prci9g0998 515 SMART GluR_14 45 407 IPR001320 GO:0015276|GO:0016020
Prci9g0998 515 MobiDBLite consensus disorder prediction 1 24 - -
Prci9g0998 515 Pfam Ligand-gated ion channel 407 443 IPR001320 GO:0015276|GO:0016020
Prci9g0998 515 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 42 460 IPR015683 -
Prci9g0998 515 Pfam Bacterial extracellular solute-binding proteins, family 3 74 406 IPR001638 -
Prci9g0998 515 SUPERFAMILY Periplasmic binding protein-like II 40 408 - -
Prci9g0998 515 Gene3D - 39 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0998 Prci-Chr9 24670629 24677145 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0998 43 452 Ion Channels AT2G29120 39.855 1.72e-78 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0998 K05387 - pcin:129319703 603.208