Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0997 ATGTCCTCGGACTCGGATATTCAGTCCTTCTCAACGCTGACTGGTCAAAGGCAGTTTGTTGATTCCAAGATCAAAAAGGAGGACGAAGAGATAGCCGCAAAGGGAAGCTTCATACATCTACTCCTAAAAAGTCGCCGTTCATACCCTCCTCTAACAACTCGCACTGAATTGCACCGCCTTCTCTGTGATACACCGAAGTTGCTGAGAAATCTCCTAAATGCATGTGAACTGAAACGTTTCAGGCTTGAATCAATCAAAACGCAGCACTTCTGTCAGATGGCATGCCCAAATCGCTACTGCTATGGCTTCCTCCTTATGATTTCTTGTTCTTGTGGTGTGCTGTTAATAGCTCCGACTGAAGCAGAAGATGATGCAGGGTCACTCTTGGGAGGGAAGAAGCTGATCATTGGACTTCCTTATAAATCAGGCTACACCCAATTTGTGGATGTACAACAACTCAATTCTTCTGATAGCAATCAGGTCGTCCAGGTTGGGGGCTATTCTATTAACGTCTTCGATGCCACAATAGCCTACCTTAAGCGTTCGAATTACAATATTTCGTTCGAGTATAGAGCTTTTGTAGACGAAGAGGGAAACAGTGCTGGGGATTACGACGCACTTGTCCACCAGATTTTCGAAGGAAAGTATGATGCTGTGGTGGGAGATGTGACGATTTTGGCAAAACGGTTGAATTATGCTGATTTTACGTTACCATATACGCATTCTAATGTGAAGATGCTTGTGAAAGTTCGACATGATCCACGGTTGAATATGTGGATTTTTGTACGACCATTTAGTTGGAGTCTTTGGTTGTCCATTGCCATAATCTCTACTTTTATCGGAGGTATCTTACTATTCATGGAACGTAATGTCAACAAAGATTCAACGCATGAAAATGCACCATGTAGGAAACAATTCAATGGGATTTCTATCCTGTGGTTTCCTGTTGTACAGGCAATTTTTCCTGAAAGAGAATCACTGGCCAAAAATTGTTCAAGGTTTGTGCTGGTGATGTGGTTGATACTGGTATTTGTGCTTATGCAAAGCTACACAGCAAGCTTATCATCGATCTTGACAATACATCAGTTGCAACCTCGGTACCTTAGTGAGAACGATGTTACAGAAGATCCCAACATTATTGTTGGATACAATCACGGTTCATTTGTGGGAGACTTATTGATCAATGGCTTGAAGATCGATAGGTCAAGGGTGAAGAGCTACGCTAGCATTAAAGACTATAAGGAGGCTTTAGATAAAGGAAGTCGTAAAGGTGGTGTTGATGCTATTTTTGATGAAGCTCCCTACTTTAAGGCTTTCCTCAAGAATTATGGCTCCAATTATGCCGTGGTTGGAACTAGGCACCATGCTGGTGGATTTGGTTTTGCATTTCGCAAGGGCTCCACGCTAACCCCGCACTTTTCTAAAGCCATATTAAATATTAGCGAGAGTAATGAAATGGACTGCATTCAGGAGACATATTTTGGAAGCAGCGATGATGATAAAAACCAAGAACTATCTAATTCATCATCATCAAATGATGCGAGTCCCAGTCTTACAGCTTACAGCTTTGCAGGTTTGTTCATGGTCATTGGAATTCTTTCACTGTTAGCTTTGCTAGTCTCTGAATGTCATATTTGGCGAAAACCTGTCATGCTCGCGCAGACTTATAGCCAACAATTTTTCAGTCGGAGCTCTAAAAGAATCAGTCCATTAGAGGAAGGTTCTCCAACAACAATAAAGGATGACAAAGAATGTTATACACGCGCAGAATATATTGGATCAGAAGTTCTAGCAGATAATTAA 1803 0.4171 MSSDSDIQSFSTLTGQRQFVDSKIKKEDEEIAAKGSFIHLLLKSRRSYPPLTTRTELHRLLCDTPKLLRNLLNACELKRFRLESIKTQHFCQMACPNRYCYGFLLMISCSCGVLLIAPTEAEDDAGSLLGGKKLIIGLPYKSGYTQFVDVQQLNSSDSNQVVQVGGYSINVFDATIAYLKRSNYNISFEYRAFVDEEGNSAGDYDALVHQIFEGKYDAVVGDVTILAKRLNYADFTLPYTHSNVKMLVKVRHDPRLNMWIFVRPFSWSLWLSIAIISTFIGGILLFMERNVNKDSTHENAPCRKQFNGISILWFPVVQAIFPERESLAKNCSRFVLVMWLILVFVLMQSYTASLSSILTIHQLQPRYLSENDVTEDPNIIVGYNHGSFVGDLLINGLKIDRSRVKSYASIKDYKEALDKGSRKGGVDAIFDEAPYFKAFLKNYGSNYAVVGTRHHAGGFGFAFRKGSTLTPHFSKAILNISESNEMDCIQETYFGSSDDDKNQELSNSSSSNDASPSLTAYSFAGLFMVIGILSLLALLVSECHIWRKPVMLAQTYSQQFFSRSSKRISPLEEGSPTTIKDDKECYTRAEYIGSEVLADN 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0997 600 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 127 548 IPR015683 -
Prci9g0997 600 Gene3D - 259 387 - -
Prci9g0997 600 SMART GluR_14 133 496 IPR001320 GO:0015276|GO:0016020
Prci9g0997 600 Pfam Bacterial extracellular solute-binding proteins, family 3 203 495 IPR001638 -
Prci9g0997 600 Pfam Ligand-gated ion channel 496 532 IPR001320 GO:0015276|GO:0016020
Prci9g0997 600 SUPERFAMILY Periplasmic binding protein-like II 108 496 - -
Prci9g0997 600 Gene3D - 464 494 - -
Prci9g0997 600 Gene3D - 127 258 - -
Prci9g0997 600 Gene3D - 406 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0997 Prci-Chr9 24621692 24625336 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0997 131 559 Ion Channels AT2G29110 37.220 5.41e-71 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0997 K05387 - pcin:129319703 1164.83