LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci9g0997	ATGTCCTCGGACTCGGATATTCAGTCCTTCTCAACGCTGACTGGTCAAAGGCAGTTTGTTGATTCCAAGATCAAAAAGGAGGACGAAGAGATAGCCGCAAAGGGAAGCTTCATACATCTACTCCTAAAAAGTCGCCGTTCATACCCTCCTCTAACAACTCGCACTGAATTGCACCGCCTTCTCTGTGATACACCGAAGTTGCTGAGAAATCTCCTAAATGCATGTGAACTGAAACGTTTCAGGCTTGAATCAATCAAAACGCAGCACTTCTGTCAGATGGCATGCCCAAATCGCTACTGCTATGGCTTCCTCCTTATGATTTCTTGTTCTTGTGGTGTGCTGTTAATAGCTCCGACTGAAGCAGAAGATGATGCAGGGTCACTCTTGGGAGGGAAGAAGCTGATCATTGGACTTCCTTATAAATCAGGCTACACCCAATTTGTGGATGTACAACAACTCAATTCTTCTGATAGCAATCAGGTCGTCCAGGTTGGGGGCTATTCTATTAACGTCTTCGATGCCACAATAGCCTACCTTAAGCGTTCGAATTACAATATTTCGTTCGAGTATAGAGCTTTTGTAGACGAAGAGGGAAACAGTGCTGGGGATTACGACGCACTTGTCCACCAGATTTTCGAAGGAAAGTATGATGCTGTGGTGGGAGATGTGACGATTTTGGCAAAACGGTTGAATTATGCTGATTTTACGTTACCATATACGCATTCTAATGTGAAGATGCTTGTGAAAGTTCGACATGATCCACGGTTGAATATGTGGATTTTTGTACGACCATTTAGTTGGAGTCTTTGGTTGTCCATTGCCATAATCTCTACTTTTATCGGAGGTATCTTACTATTCATGGAACGTAATGTCAACAAAGATTCAACGCATGAAAATGCACCATGTAGGAAACAATTCAATGGGATTTCTATCCTGTGGTTTCCTGTTGTACAGGCAATTTTTCCTGAAAGAGAATCACTGGCCAAAAATTGTTCAAGGTTTGTGCTGGTGATGTGGTTGATACTGGTATTTGTGCTTATGCAAAGCTACACAGCAAGCTTATCATCGATCTTGACAATACATCAGTTGCAACCTCGGTACCTTAGTGAGAACGATGTTACAGAAGATCCCAACATTATTGTTGGATACAATCACGGTTCATTTGTGGGAGACTTATTGATCAATGGCTTGAAGATCGATAGGTCAAGGGTGAAGAGCTACGCTAGCATTAAAGACTATAAGGAGGCTTTAGATAAAGGAAGTCGTAAAGGTGGTGTTGATGCTATTTTTGATGAAGCTCCCTACTTTAAGGCTTTCCTCAAGAATTATGGCTCCAATTATGCCGTGGTTGGAACTAGGCACCATGCTGGTGGATTTGGTTTTGCATTTCGCAAGGGCTCCACGCTAACCCCGCACTTTTCTAAAGCCATATTAAATATTAGCGAGAGTAATGAAATGGACTGCATTCAGGAGACATATTTTGGAAGCAGCGATGATGATAAAAACCAAGAACTATCTAATTCATCATCATCAAATGATGCGAGTCCCAGTCTTACAGCTTACAGCTTTGCAGGTTTGTTCATGGTCATTGGAATTCTTTCACTGTTAGCTTTGCTAGTCTCTGAATGTCATATTTGGCGAAAACCTGTCATGCTCGCGCAGACTTATAGCCAACAATTTTTCAGTCGGAGCTCTAAAAGAATCAGTCCATTAGAGGAAGGTTCTCCAACAACAATAAAGGATGACAAAGAATGTTATACACGCGCAGAATATATTGGATCAGAAGTTCTAGCAGATAATTAA	1803	0.4171	MSSDSDIQSFSTLTGQRQFVDSKIKKEDEEIAAKGSFIHLLLKSRRSYPPLTTRTELHRLLCDTPKLLRNLLNACELKRFRLESIKTQHFCQMACPNRYCYGFLLMISCSCGVLLIAPTEAEDDAGSLLGGKKLIIGLPYKSGYTQFVDVQQLNSSDSNQVVQVGGYSINVFDATIAYLKRSNYNISFEYRAFVDEEGNSAGDYDALVHQIFEGKYDAVVGDVTILAKRLNYADFTLPYTHSNVKMLVKVRHDPRLNMWIFVRPFSWSLWLSIAIISTFIGGILLFMERNVNKDSTHENAPCRKQFNGISILWFPVVQAIFPERESLAKNCSRFVLVMWLILVFVLMQSYTASLSSILTIHQLQPRYLSENDVTEDPNIIVGYNHGSFVGDLLINGLKIDRSRVKSYASIKDYKEALDKGSRKGGVDAIFDEAPYFKAFLKNYGSNYAVVGTRHHAGGFGFAFRKGSTLTPHFSKAILNISESNEMDCIQETYFGSSDDDKNQELSNSSSSNDASPSLTAYSFAGLFMVIGILSLLALLVSECHIWRKPVMLAQTYSQQFFSRSSKRISPLEEGSPTTIKDDKECYTRAEYIGSEVLADN	600

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci9g0997	600	PANTHER	IONOTROPIC GLUTAMATE RECEPTOR	127	548	IPR015683	-
	Prci9g0997	600	Gene3D	-	259	387	-	-
	Prci9g0997	600	SMART	GluR_14	133	496	IPR001320	GO:0015276\|GO:0016020
	Prci9g0997	600	Pfam	Bacterial extracellular solute-binding proteins, family 3	203	495	IPR001638	-
	Prci9g0997	600	Pfam	Ligand-gated ion channel	496	532	IPR001320	GO:0015276\|GO:0016020
	Prci9g0997	600	SUPERFAMILY	Periplasmic binding protein-like II	108	496	-	-
	Prci9g0997	600	Gene3D	-	464	494	-	-
	Prci9g0997	600	Gene3D	-	127	258	-	-
	Prci9g0997	600	Gene3D	-	406	463	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci9g0997	Prci-Chr9	24621692	24625336	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci9g0997	131	559	Ion Channels	AT2G29110	37.220	5.41e-71	244

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci9g0997	K05387		-	pcin:129319703	1164.83

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