Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0996 ATGGCAAAACCAAAGTCCACTTACTATGACTACGTCTACCTCATTTCTTTTATCGTTTTATTCATCGCTCAGTTTATTAGAACATGTGATGGTGCAGTCCCACTATTGGGTGGAAAGAAGTTGATAATTGGTGTGCCTAAGAAACCTGGTTTCACTCAATTTGTAGACGCACAAGTGAATCCGAGTGATAAGAGACAGTTGGTGAAGGTCACAGGCTTCTCCATCGAGGTTTTTAATGCCACAGTATCTCATCTTCAGAGCACAGGCTTCAATATTTCTTTTGAGTTTAGGGCTTTTGTAAATGACCATGGAGACAGCGCAGGAACCTACGACACACTACTTAGAAATATTCCAGGACAGTATGATGCTGTTGTGGGAGATGTGACGATTGTGGCGAATCGATCAAATTATGTAGACCTTACATTACCATATGCGGAGTCAGGTGTAAAGATGCTTGTAAAAGTTCGACAAGATCAAAACTCCAACATGTGGAGTTTCGTCCGACCTTTTACCTGGGATCTTTGGCTGTCCATCGTCATGTTCAGTATTTTCATAGGAGGCACTCTATGGTTCATGGAACGTAATGCTAATAAGAATGAAGGACTTGAAATTCCACATCAAAGAGGACAACTCATCAATAGAGTGTCGATCTTGTGGCTTCCTTTATCACATGCGATTCTCCCTGAAAGAGAGTCATTAGTGAAGAATTGCTCAAGGTTTGTGTTGATGTTGTGGTTGATATTAGCATGCATCCTCATGCAAAGCTACACAGCAAGCTTGTCATCAATATTGACAGTAGATCAGTTGCAGCCTAGTTACCTTGGTTTTGATGATCTCGTAAGAGATCCACAAATTAACATTGGATACCAACGTGACTCATTTGTCAGAGATTTATTGGTGGGTCGCTTAAACTTCGATGAATCAAGACTCAAGTCTTTCCGCACCATCGAAGAATACAAAGATGCGTTAGATAAAGGAAGCGGAAATGGTGGTGTAGATGCTATTTTTGATGAAGCTCCTTATATTAAGGTCTTCCTCAAAGAATCTGGTCTTAGTTATGGCATGTTTGGCCTCAGCTATCGCACTGGTGGTTTTGGTTTTGCATTTCCAAAAGACTCCAACATAACCTCGTACTTTTCAAGAGCCATATTAAATATCACTGAAAGTGACGGAATGGAGCAGATTGAAAGGAAATATTTTGGAAGTAGTGACGTGGACGATGAACTCCAAGAACAGATGATGTTGTCGTCTGACAATACCAGAACTAGTCTCACCACATATAGTTTTGGAGGTTTGTTCATTGTGATAGGAGGCCTTACAGTTTTGGCTTTGCTGGTTTCAGAAAGTGGTGTTTGGAGAAACCCTATCATGTTGGCAAAAGCTTGTAGCAAAACATTGTTGACTCGATGTTCTGAAAAAATAAGTCAAATGGGAAAGGGTTCTGCACAAAGTTCTCAAAATCCAACTAGGCCAACCAGAATCGACGCTTAG 1491 0.4078 MAKPKSTYYDYVYLISFIVLFIAQFIRTCDGAVPLLGGKKLIIGVPKKPGFTQFVDAQVNPSDKRQLVKVTGFSIEVFNATVSHLQSTGFNISFEFRAFVNDHGDSAGTYDTLLRNIPGQYDAVVGDVTIVANRSNYVDLTLPYAESGVKMLVKVRQDQNSNMWSFVRPFTWDLWLSIVMFSIFIGGTLWFMERNANKNEGLEIPHQRGQLINRVSILWLPLSHAILPERESLVKNCSRFVLMLWLILACILMQSYTASLSSILTVDQLQPSYLGFDDLVRDPQINIGYQRDSFVRDLLVGRLNFDESRLKSFRTIEEYKDALDKGSGNGGVDAIFDEAPYIKVFLKESGLSYGMFGLSYRTGGFGFAFPKDSNITSYFSRAILNITESDGMEQIERKYFGSSDVDDELQEQMMLSSDNTRTSLTTYSFGGLFIVIGGLTVLALLVSESGVWRNPIMLAKACSKTLLTRCSEKISQMGKGSAQSSQNPTRPTRIDA 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0996 496 CDD GluR_Plant 39 400 - -
Prci9g0996 496 Gene3D - 163 291 - -
Prci9g0996 496 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 38 447 IPR015683 -
Prci9g0996 496 Gene3D - 37 162 - -
Prci9g0996 496 MobiDBLite consensus disorder prediction 477 496 - -
Prci9g0996 496 Pfam Bacterial extracellular solute-binding proteins, family 3 69 401 IPR001638 -
Prci9g0996 496 SUPERFAMILY Periplasmic binding protein-like II 18 402 - -
Prci9g0996 496 Gene3D - 292 405 - -
Prci9g0996 496 SMART GluR_14 40 402 IPR001320 GO:0015276|GO:0016020
Prci9g0996 496 Pfam Ligand-gated ion channel 402 437 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0996 Prci-Chr9 24612541 24614803 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0996 37 446 Ion Channels AT2G29120 40.146 7.79e-84 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0996 K05387 - pcin:129319703 518.85