Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0995 ATGGAACACAATGTCCAAGAAGATTCAACAATTGAAAATTCTCCCATTAGAAAACAACTTAGTGGGGTTTCTATCTTGTGGCTCCCTATAATGCAAGCAGTTTTTCTTGAAAGAGAATTATTGGCGAGGAATTGCTCAAGGTTTGTGTTGGTGATGTGGTTGATTCTGGTATCTATACTAATGCAAAGTTATAGTGCATGCTTATCATCAATTTTGATGGTAAACCAACTTCAATCTCATTACCCTAGTGAGGATGACATTATAACAAACCCTAAAATTTACATTGGATGCCACTATGGTTCATTCATAAGCAGCTTATTGGTTGATAGCTTGACAGTTGACAGTTCAAGGGTAAAGGAATACCCAGGCATTAAACAATATAAGGAGGCTTTAGACAAAGGAAGCCAAAGAGGCGGTGTCAATGCCATTTTTGACGAAGTTCCCTACATTAAAGTCTTCCTTGCCAAATATGGTTCAAATTATGCCATGGTGGGGCCTAGGCACCGCACTGCTGGATTTGGCTTTGCATTTCGTAAGGATTCGACCATAACCTCGTACTTTTCCCAAGCCATATTAAATATAAGCCAGAGTAAAGAAATGGACTACATTGAGGATAGATATTTTAACACTCGTGATGATGATGGCATATCTTCTTCATTGTCATCAAATGATGACAGTTCCAGCCTCACCGCATATAGCTTTGCAGGTTTGTTCGTAGTATTCGGAATTCTCTCGCTGTTAGCTTTGTTAATCTCTGAACATCGTTTTTGGAGAAGACATGTCATGCTAATGAAAATGTATAGCAAAAAATTCTTGAGCCGGAGTTCCACAAGAACCAATAATATGTCAGAGGAAGGCTCTAGAACAAGAAGAAATGATGAAGATGGAGAAGGTTCTATGAACAGAGAAAATATTGGGTCAGGAGATGGAGAATACAAGCACGAAAAGAAATTGGTGGCATCTATTCCCTAA 972 0.3868 MEHNVQEDSTIENSPIRKQLSGVSILWLPIMQAVFLERELLARNCSRFVLVMWLILVSILMQSYSACLSSILMVNQLQSHYPSEDDIITNPKIYIGCHYGSFISSLLVDSLTVDSSRVKEYPGIKQYKEALDKGSQRGGVNAIFDEVPYIKVFLAKYGSNYAMVGPRHRTAGFGFAFRKDSTITSYFSQAILNISQSKEMDYIEDRYFNTRDDDGISSSLSSNDDSSSLTAYSFAGLFVVFGILSLLALLISEHRFWRRHVMLMKMYSKKFLSRSSTRTNNMSEEGSRTRRNDEDGEGSMNRENIGSGDGEYKHEKKLVASIP 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0995 323 MobiDBLite consensus disorder prediction 284 300 - -
Prci9g0995 323 Pfam Ligand-gated ion channel 13 243 IPR001320 GO:0015276|GO:0016020
Prci9g0995 323 SMART GluR_14 6 210 IPR001320 GO:0015276|GO:0016020
Prci9g0995 323 MobiDBLite consensus disorder prediction 307 323 - -
Prci9g0995 323 Gene3D - 178 208 - -
Prci9g0995 323 MobiDBLite consensus disorder prediction 275 323 - -
Prci9g0995 323 SUPERFAMILY Periplasmic binding protein-like II 91 209 - -
Prci9g0995 323 FunFam Glutamate receptor 125 173 - -
Prci9g0995 323 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 21 275 IPR015683 -
Prci9g0995 323 Gene3D - 78 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0995 Prci-Chr9 24561314 24564842 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0995 1 260 Ion Channels AT2G29120 37.308 4.91e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0995 K05387 - pcin:129319965 623.239