Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0993 ATGATAGTGGCAAATAGGTCAAACTTTGTAGATTTTACATTACCATATGCACAGTATGATGTGAGGATTCTTGTGAAACTTCGAAATGATCCACGTTTGAATATGTGGATTTTTGAATGGCCATTTAGTTGGGACATATGGCTGTGCATTGTTGTGGTCTGTATTTTTACAGGAGGTATCATACTATTCATGGAACACAATGTCCAAGAAGATTCAACAATTGAAAATTCTCCCATTAGAAAACAACTTAGTGGGGTTTCTATCTTGTGGCTCCCTATAATGCAAGCAGTTTTTCTTGAAAGAGAATTATTGGCGAGGAATTGCTCAAGGTTTGTGTTGGTGATGTGGTTGATTCTGGTATCTATACTAATGCAAAGTTATAGTGCATGCTTATCATCAATTTTGATGGTAAACCAACTTCAATCTCATTACCCTAGTGAGGATGACATTATAACAAACCCTAAAATTTACATTGGATGCCACTATGGTTCATTCATAAGCAGCTTATTGGTTGATAGCTTGACAGTTGACAGTTCAAGGGTAAAGGAATACCCAGGCATTAAACAATATAAGGAGGCTTTAGACAAAGGAAGCCAAAGAGGCGGTGTCAATGCCATTTTTGACGAAGTTCCCTACATTAAAGTCTTCCTTGCCAAATATGGTTCAAATTATGCCATGGTGGGGCCTAGGCACCGCACTGCTGGATTTGGCTTTGCATTTCGTAAGGATTCGACCATAACCTCGTACTTTTCCCAAGCCATATTAAATATAAGCCAGAGTAAAGAAATGGACTACATTGAGGATAGATATTTTAACACTCGTGATGATGATGGCATATCTTCTTCATTGTCATCAAATGATGACAGTTCCAGCCTCACCGCATATAGCTTTGCAGGTTTGTTCGTAGTATTCGGAATTCTCTCGCTGTTAGCTTTGTTAATCTCTGAACATCGTTTTTGGAGAAGACATGTCATGCTAATGAAAATGTATAGCAAAAAATTCTTGAGCCGGAGTTCCACAAGAACCAATAATATGTCAGAGGAAGGCTCTAGAACAAGAAGAAATGATGAAGATGGAGAAGGTTCTATGAACAGAGAAAATATTGGGTCAGGAGATGGAGAATACAAGCACGAAAAGAAATTGGTGGCATCTATTCCCTAA 1161 0.3824 MIVANRSNFVDFTLPYAQYDVRILVKLRNDPRLNMWIFEWPFSWDIWLCIVVVCIFTGGIILFMEHNVQEDSTIENSPIRKQLSGVSILWLPIMQAVFLERELLARNCSRFVLVMWLILVSILMQSYSACLSSILMVNQLQSHYPSEDDIITNPKIYIGCHYGSFISSLLVDSLTVDSSRVKEYPGIKQYKEALDKGSQRGGVNAIFDEVPYIKVFLAKYGSNYAMVGPRHRTAGFGFAFRKDSTITSYFSQAILNISQSKEMDYIEDRYFNTRDDDGISSSLSSNDDSSSLTAYSFAGLFVVFGILSLLALLISEHRFWRRHVMLMKMYSKKFLSRSSTRTNNMSEEGSRTRRNDEDGEGSMNRENIGSGDGEYKHEKKLVASIP 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0993 386 Gene3D - 188 236 - -
Prci9g0993 386 SMART GluR_14 55 273 IPR001320 GO:0015276|GO:0016020
Prci9g0993 386 MobiDBLite consensus disorder prediction 347 363 - -
Prci9g0993 386 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 338 IPR015683 -
Prci9g0993 386 SUPERFAMILY Periplasmic binding protein-like II 2 272 - -
Prci9g0993 386 FunFam Glutamate receptor 188 236 - -
Prci9g0993 386 Gene3D - 237 271 - -
Prci9g0993 386 Gene3D - 32 177 - -
Prci9g0993 386 MobiDBLite consensus disorder prediction 370 386 - -
Prci9g0993 386 Pfam Bacterial extracellular solute-binding proteins, family 3 4 272 IPR001638 -
Prci9g0993 386 MobiDBLite consensus disorder prediction 338 386 - -
Prci9g0993 386 Pfam Ligand-gated ion channel 273 306 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0993 Prci-Chr9 24561314 24564842 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0993 2 323 Ion Channels AT2G29120 38.199 3.15e-54 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0993 K05387 - pcin:129319965 757.288