LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci9g0992	ATGATAGTGGCAAATAGGTCAAACTTTGTAGATTTTACATTACCATATGCACAGTATGATGTGAGGATTCTTGTGAAACTTCGAAATGATCCACGTTTGAATATGTGGATTTTTGAATGGCCATTTAGTTGGGACATATGGCTGTGCATTGTTGTGGTCTGTATTTTTACAGGAGGTATCATACTATTCATGGAACACAATGTCCAAGAAGATTCAACAATTGAAAATTCTCCCATTAGAAAACAACTTAGTGGGGTTTCTATCTTGTGGCTCCCTATAATGCAAGCAGTTTTTCTTGAAAGAGAATTATTGGCGAGGAATTGCTCAAGCTTGACAGTTGACAGTTCAAGGGTAAAGGAATACCCAGGCATTAAACAATATAAGGAGGCTTTAGACAAAGGAAGCCAAAGAGGCGGTGTCAATGCCATTTTTGACGAAGTTCCCTACATTAAAGTCTTCCTTGCCAAATATGGTTCAAATTATGCCATGGTGGGGCCTAGGCACCGCACTGCTGGATTTGGCTTTGCATTTCGTAAGGATTCGACCATAACCTCGTACTTTTCCCAAGCCATATTAAATATAAGCCAGAGTAAAGAAATGGACTACATTGAGGATAGATATTTTAACACTCGTGATGATGATGGCATATCTTCTTCATTGTCATCAAATGATGACAGTTCCAGCCTCACCGCATATAGCTTTGCAGGTTTGTTCGTAGTATTCGGAATTCTCTCGCTGTTAGCTTTGTTAATCTCTGAACATCGTTTTTGGAGAAGACATGTCATGCTAATGAAAATGTATAGCAAAAAATTCTTGAGCCGGAGTTCCACAAGAACCAATAATATGTCAGAGGAAGGCTCTAGAACAAGAAGAAATGATGAAGATGGAGAAGGTTCTATGAACAGAGAAAATATTGGGTCAGGAGATGGAGAATACAAGCACGAAAAGAAATTGGTGGCATCTATTCCCTAA	972	0.3889	MIVANRSNFVDFTLPYAQYDVRILVKLRNDPRLNMWIFEWPFSWDIWLCIVVVCIFTGGIILFMEHNVQEDSTIENSPIRKQLSGVSILWLPIMQAVFLERELLARNCSSLTVDSSRVKEYPGIKQYKEALDKGSQRGGVNAIFDEVPYIKVFLAKYGSNYAMVGPRHRTAGFGFAFRKDSTITSYFSQAILNISQSKEMDYIEDRYFNTRDDDGISSSLSSNDDSSSLTAYSFAGLFVVFGILSLLALLISEHRFWRRHVMLMKMYSKKFLSRSSTRTNNMSEEGSRTRRNDEDGEGSMNRENIGSGDGEYKHEKKLVASIP	323

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci9g0992	323	MobiDBLite	consensus disorder prediction	284	300	-	-
	Prci9g0992	323	Gene3D	-	1	53	-	-
	Prci9g0992	323	PANTHER	IONOTROPIC GLUTAMATE RECEPTOR	2	91	IPR015683	-
	Prci9g0992	323	Gene3D	-	125	173	-	-
	Prci9g0992	323	MobiDBLite	consensus disorder prediction	307	323	-	-
	Prci9g0992	323	MobiDBLite	consensus disorder prediction	275	323	-	-
	Prci9g0992	323	FunFam	Glutamate receptor	125	173	-	-
	Prci9g0992	323	SMART	GluR_14	1	210	IPR001320	GO:0015276\|GO:0016020
	Prci9g0992	323	Pfam	Bacterial extracellular solute-binding proteins, family 3	4	209	IPR001638	-
	Prci9g0992	323	SUPERFAMILY	Periplasmic binding protein-like II	2	209	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci9g0992	Prci-Chr9	24561313	24564842	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci9g0992	2	260	Ion Channels	AT2G29120	31.962	9.43e-35	132

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci9g0992	K05387		-	pcin:129319965	498.819

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