Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0992 ATGATAGTGGCAAATAGGTCAAACTTTGTAGATTTTACATTACCATATGCACAGTATGATGTGAGGATTCTTGTGAAACTTCGAAATGATCCACGTTTGAATATGTGGATTTTTGAATGGCCATTTAGTTGGGACATATGGCTGTGCATTGTTGTGGTCTGTATTTTTACAGGAGGTATCATACTATTCATGGAACACAATGTCCAAGAAGATTCAACAATTGAAAATTCTCCCATTAGAAAACAACTTAGTGGGGTTTCTATCTTGTGGCTCCCTATAATGCAAGCAGTTTTTCTTGAAAGAGAATTATTGGCGAGGAATTGCTCAAGCTTGACAGTTGACAGTTCAAGGGTAAAGGAATACCCAGGCATTAAACAATATAAGGAGGCTTTAGACAAAGGAAGCCAAAGAGGCGGTGTCAATGCCATTTTTGACGAAGTTCCCTACATTAAAGTCTTCCTTGCCAAATATGGTTCAAATTATGCCATGGTGGGGCCTAGGCACCGCACTGCTGGATTTGGCTTTGCATTTCGTAAGGATTCGACCATAACCTCGTACTTTTCCCAAGCCATATTAAATATAAGCCAGAGTAAAGAAATGGACTACATTGAGGATAGATATTTTAACACTCGTGATGATGATGGCATATCTTCTTCATTGTCATCAAATGATGACAGTTCCAGCCTCACCGCATATAGCTTTGCAGGTTTGTTCGTAGTATTCGGAATTCTCTCGCTGTTAGCTTTGTTAATCTCTGAACATCGTTTTTGGAGAAGACATGTCATGCTAATGAAAATGTATAGCAAAAAATTCTTGAGCCGGAGTTCCACAAGAACCAATAATATGTCAGAGGAAGGCTCTAGAACAAGAAGAAATGATGAAGATGGAGAAGGTTCTATGAACAGAGAAAATATTGGGTCAGGAGATGGAGAATACAAGCACGAAAAGAAATTGGTGGCATCTATTCCCTAA 972 0.3889 MIVANRSNFVDFTLPYAQYDVRILVKLRNDPRLNMWIFEWPFSWDIWLCIVVVCIFTGGIILFMEHNVQEDSTIENSPIRKQLSGVSILWLPIMQAVFLERELLARNCSSLTVDSSRVKEYPGIKQYKEALDKGSQRGGVNAIFDEVPYIKVFLAKYGSNYAMVGPRHRTAGFGFAFRKDSTITSYFSQAILNISQSKEMDYIEDRYFNTRDDDGISSSLSSNDDSSSLTAYSFAGLFVVFGILSLLALLISEHRFWRRHVMLMKMYSKKFLSRSSTRTNNMSEEGSRTRRNDEDGEGSMNRENIGSGDGEYKHEKKLVASIP 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0992 323 MobiDBLite consensus disorder prediction 284 300 - -
Prci9g0992 323 Gene3D - 1 53 - -
Prci9g0992 323 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 91 IPR015683 -
Prci9g0992 323 Gene3D - 125 173 - -
Prci9g0992 323 MobiDBLite consensus disorder prediction 307 323 - -
Prci9g0992 323 MobiDBLite consensus disorder prediction 275 323 - -
Prci9g0992 323 FunFam Glutamate receptor 125 173 - -
Prci9g0992 323 SMART GluR_14 1 210 IPR001320 GO:0015276|GO:0016020
Prci9g0992 323 Pfam Bacterial extracellular solute-binding proteins, family 3 4 209 IPR001638 -
Prci9g0992 323 SUPERFAMILY Periplasmic binding protein-like II 2 209 - -
Prci9g0992 323 Gene3D - 174 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0992 Prci-Chr9 24561313 24564842 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0992 2 260 Ion Channels AT2G29120 31.962 9.43e-35 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0992 K05387 - pcin:129319965 498.819