Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0991 ATGGCCAACCCAAATTACTATTACCATGGTTATCTTGTAATGTTTTCTTGTGCTGTGTTGTTAACAGCTCAGATTGGAGCAAGTGATGGTGCAGGGTCACTCCTGGGAGGGAAGAAGTTGATAGTTGGTGTTCCTAAGAAAGTGAGCTTCATCCAGTTTGTGGATGTACAACTGAATCCCTTGAACAAGAGTCAGCTCGTGAATGTTACAGGCTATTCTATTGACATTTTCTTGGCTGCAGTAGCTTATCTTCAGCGTTCAAACTACAATATTTCTTTCGAGTTTAGTGCTTTTGTAGACAAAAATGGAAACACTATTGGGGGTTACGACGCACTCATCCGCCAGGTTAACGAAGGAAAGTATGATGCTGCTGTGGCAGATTTGACAATAGTGGCAAATAGGTCAAACTATGTAGATTTTACATTACCATATGCACAGTCTGATGTGAGGATGCTTGTGAAACTCCGAAATGATCCACGCTTGAATATGTGGACTTTTGTACAACCATTTAGCTGGGACATGTGGCTATGCATTGTCGTGGTCTCTGTTTTTACTGGAGGTATTATATTATTCATGGAACACAATGTCCAAGAAGATTCAATGCTTAAAAATTCTCCCATTAGAAAACAACTTAGTGGGGTTTCAATCTTGTGGCTCCCTGTAGTGCAAGCAGTTTTTCCTGAAAGAGGATCATTGGCAAAGAATTGCTCAAAGTTTGTGTTGGTGATGTGGTTGATTCTAGTATTTATACTGATGCAAAGTTACACTGCTTGCTTATCATCAATCTTGACAGTACATCAGCTTCAATCTCATTACCCTAGTGAGGATGACATTATAACAGACCCTAGCATTTTTGTTGGATGCCACTATGGCTCATTCATAAATGGCTTATTAGTTGATAGCTTGAGTATTGATAGTTCAAGAGTGAAGGAATACTCGAGCATTAAGCAATATAAGGAGGCTTTAGAAAAGGGAAGCCGAAGAGGTGGTGTTGATGCCATTTTTGACGAGGTTCCCTACATTAAAGTCTTTCTAGCCAAATATGGTTCAAATTATGCCATGGTGGGGCCTAGGCATCGCAATGCTGGATTTGGCTTTGCATTTTGTAAGAATTCGACCTTAACCTCGTACTTTTCTCAAGCCATATTAAATGTAAGTGAGAGTAAAGAAATGGACTGCATTGAGGATAGATATTTTAACACCTGTGAAGATGATGGCATATCTTCTTCATCGTCAGATGTTGATAGTCCCAGCCTCACCGCATATAGCTTTGCAGGTTTGTTTGTAGTATTTGGAATTCTCTCACTCTTAGCTTTGTTAATCTCTGAACATCATTTTTGGAGAAGACATGTCATGCTTATGAAAATGCATAGCCAAAAATTCTTGAGCTGGAGTTCCACAAGAACCAACACGTCAGAGGAAGGTTCTAGAACGAGAATAAATGTTGATGATGATGGAGAAGGTTCTGTGAACAGAGAAAATATTAGATTATCAGGAGATGGAGAATATAACTACGTAAAGATATTGGTGGCATCTCTTCCCTAA 1545 0.3942 MANPNYYYHGYLVMFSCAVLLTAQIGASDGAGSLLGGKKLIVGVPKKVSFIQFVDVQLNPLNKSQLVNVTGYSIDIFLAAVAYLQRSNYNISFEFSAFVDKNGNTIGGYDALIRQVNEGKYDAAVADLTIVANRSNYVDFTLPYAQSDVRMLVKLRNDPRLNMWTFVQPFSWDMWLCIVVVSVFTGGIILFMEHNVQEDSMLKNSPIRKQLSGVSILWLPVVQAVFPERGSLAKNCSKFVLVMWLILVFILMQSYTACLSSILTVHQLQSHYPSEDDIITDPSIFVGCHYGSFINGLLVDSLSIDSSRVKEYSSIKQYKEALEKGSRRGGVDAIFDEVPYIKVFLAKYGSNYAMVGPRHRNAGFGFAFCKNSTLTSYFSQAILNVSESKEMDCIEDRYFNTCEDDGISSSSSDVDSPSLTAYSFAGLFVVFGILSLLALLISEHHFWRRHVMLMKMHSQKFLSWSSTRTNTSEEGSRTRINVDDDGEGSVNRENIRLSGDGEYNYVKILVASLP 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0991 514 Gene3D - 33 163 - -
Prci9g0991 514 SMART GluR_14 39 401 IPR001320 GO:0015276|GO:0016020
Prci9g0991 514 CDD GluR_Plant 38 399 - -
Prci9g0991 514 Gene3D - 164 292 - -
Prci9g0991 514 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 37 463 IPR015683 -
Prci9g0991 514 Pfam Bacterial extracellular solute-binding proteins, family 3 69 400 IPR001638 -
Prci9g0991 514 Pfam Ligand-gated ion channel 401 433 IPR001320 GO:0015276|GO:0016020
Prci9g0991 514 Gene3D - 295 403 - -
Prci9g0991 514 SUPERFAMILY Periplasmic binding protein-like II 12 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0991 Prci-Chr9 24545359 24548881 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0991 37 450 Ion Channels AT2G29120 39.329 1.55e-74 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0991 K05387 - pcin:129319224 997.653