Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0982 ATGAGTTTCCACCCAAATACTTCTCTTCACTTGAATATCCCAGACGACAATAATGCTCCATTACTGAATCTGAATCTTCTTCTTGAACCTTCCTCTTCTTCTGCTTCTTCATGTTCAATTACAGCTTCCAATTCCAAGGAGCCCAGGATTTTCTCTTGCAATTATTGCCAGAAAAAATTCTACAGCTCTCAAGCTCTAGGAGGTCACCAAAACGCTCACAAGCTTGAACGCACCCTAGCCAAGAAAAGCAGAGAGCTACTAAGCAGTTCGATTTCTTCCATGGAACCTTATCACAATAACAGTGGTGGATCGGCAGGATCGGACCACCAGCACCACTTGAGCTTCAATGCATCGAACCATCTTAGCAATTGGGTCAGGTCGTCGCAGGAGGCGCTGGGCGTGTTCGTGAACCAAGGTCACGGCGGAAGGACGACGAGAGATTTTAGCTATGGTTCCAAGGAAATTGTTCAGGAGGATATTAGCCAGCTTGACCTCTCATTAAGGCTGTAA 510 0.4588 MSFHPNTSLHLNIPDDNNAPLLNLNLLLEPSSSSASSCSITASNSKEPRIFSCNYCQKKFYSSQALGGHQNAHKLERTLAKKSRELLSSSISSMEPYHNNSGGSAGSDHQHHLSFNASNHLSNWVRSSQEALGVFVNQGHGGRTTRDFSYGSKEIVQEDISQLDLSLRL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0982 169 FunFam Zinc finger protein 2 28 98 - -
Prci9g0982 169 SUPERFAMILY beta-beta-alpha zinc fingers 48 78 IPR036236 -
Prci9g0982 169 MobiDBLite consensus disorder prediction 93 112 - -
Prci9g0982 169 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 17 118 IPR044246 GO:0009788
Prci9g0982 169 ProSiteProfiles Zinc finger C2H2 type domain profile. 51 78 IPR013087 -
Prci9g0982 169 ProSitePatterns Zinc finger C2H2 type domain signature. 53 73 IPR013087 -
Prci9g0982 169 Gene3D Classic Zinc Finger 31 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0982 Prci-Chr9 24435766 24436501 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0982 1 97 C2H2 Transcription Factor Family AT5G57520 66.337 1.13e-31 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci9g0982 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0982 - - pcin:129299831 201.06