Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0973 ATGGATAGTTCTACTGTAATTCGACCTTCTACACCCTGTTCTGGTTCTGCACCGGGTTCGGCGCCTGGTTGCAATGATGATAGCCAGCGGGTAAAATTCTTATGTAGTTTTCTAGGAAATATAATGCCCCGTCCCCAAGATGGGAAGCTTCGATATGTTGGTGGAGAGACGCGAATTGTGAGTGTTCCACGAGATATTGGTTATGAGGAGTTGATGAGTAAGATGAGGGAGCTCTATGATGGGGCAGCAGTCTTGAAATACCAGCAACCTGACGAGGATCTTGATGCCCTTGTCTCCGTTGTGAATGATGATGATGTGGTTAATATGATGGAAGAGTATGACAAATTGGGTTCAAGTGATGGATTCCATAGGCTCAGAATTTTTTTGTTCTCACAATCTGAACAAGATGTTTCTTCACATTTCATTGATGGGGATGACAGGGATACTGAGAGAAGGTATGTTGATGCATTGAATAATTTAAATGATGCTTCTGATTTTAGGAAGCAGCAACAAGGTGAGTTTCCTATGCTTGGTTCAGTTGAGGATATGCATGTAGCTGATCAGTTCTTTAATCCAATCAATGTGGATGGTGGCCTTCATGGCCAGAGAAGTGGTGAGATACCCATAACTCATTTTAACTTGCATCATCCCACACTACCTCACATCGGATCAGCACAGCACCAGCAACCTATATCCCAGAGGTATAGTGACATAGATGCTCCATGGAGTTCTGCATATTACTCTCCCAGGCATCATGGTCACCATGACTCTAGATCTGTGGTAGAATTTCCATCTTCTCCTTCTTCTGCAAGGTACCAGATGCCATTTTCAGAGCTACCAGAGAAATGCATTGATAGAATGCCCGAAGAATATACTCGGCATCAGGTAAATCACCATCCTGTGTATGACAATCAACCACAATATTCTGATAATGTTGTGTGGTATCCAACTGGAGCTGCATCTAGTGAGAAGTCAGGTTTTCCTAGCAATGTTCTTCATGGTCCTCATGTTATTGATGGGAGTAGTATTTGTGAGCACTGCCGGATAAGTTTTCAGAGAGGTCAATCACATTTTGAGCATCCTAATATTAATAATGGACTTCCACCAGTCGCTAATCCATGTGCAGAATGCCATGCAAACAGGGATACTTTTATAATGAATGCTGATGCAAAGTTGCATCCTGTTATTTATCCTAATGAGGCAAATAATGATCATAGATCTGCTTATAACGATACTCAAAATCATGAGAGAGGATGGGCTTTGCCACATCAAACAAATAATCGGGTTGAGGAAGCAAGGAGCCATGTTTCTGGATCAGGAAGATTGAATGATCATTATGTTCTTGATGGTTCTGGCATAAATTACTCTCTTGGCCATGGCAATGTGGCTGATGGGCATCATCTGCCTTCGAATTACGTTCACCAAAGAGTTGGACCTGAATTGGGACCTGAACTGTTTCATGATCAAGCTGTGACTACTACAGCCCATCCACAAATTTCTCCTTTGGAAGAACGCAGTGTGCGATATGGGAACCCATCTCCTTATGGAGTTGATAGTCATTACCCTGTGACACATGGACATGTACCTGGGCTTACTTTCTGGAGAAATACTGCAGCTCCACTTCACATTGGACCATCTTATGAGGCATCCAGTCCACCTCAGCAGTTAAATGGTGTGTTAAGTGCAGGAATAAGGGGAGAGGGTAGTCCAAGAATTTACATTGGACCAGATAGTCAAAGTCCTTGGGTTGATTCCTCGCACAAAATGTCAGGTCATGATGGATTACCAGTCCCAGAATTTCCTTATCCTCATGCTGTGAAGTTCAATCCAAGGGCTCTTGGTCAAGAAAATCAACATCCAGTTGCTGTGGACACCATTCATTCCCCACAGGACATGAATGTTGGCATTCGATTGGAACCAGTGCAGCTTCCAAAATCACCTTTTAATATGGTTCACAACAATGAGGTTTCTAACAATGGTACTCATATAACTGATGCAATGGGGTCGCTGAGCTTGCACGATGAAGAGAAAGGGACAGAGAATGCAGATAAGGTTGAGAACTCTAATGCTCAAAGTATATCTTTTTCTGAGCAAAACAAAATTGCTGAGAATAATAGTGAAGCAGCTGCTTCTCTTGACTCTAAAAATTCAAAATCAAAACCTGTTGAAGAATGTGGTGAGGTTACGAAACTTGTTGATGGGGATCTAATTGCTCCTGAAGATTCCAAGCATCTAGCTAACCAATTCAGTTTCTTGCCTGAGTTGATTGCTTCTGTAAAAAAGGCTGCATTGGAAGGAGCTGAAGAGGTGAAAGCTAGAGCTAAGGAGCACACCACGTCTCAGAATAATTCAGCAATCAAAGATGACACAGCAAATGAAGGAGAGACAGGGAATGCTCTTGGTGATTTAGAATTGGACTCTGATAACGACAATGTGGATACTTCTAAAATTGAACCTACAAAAGCTGAGGCAGAAGCTATTGCTAGAGGATTGCAGACAATTAAAAATTGTGATTTGGAAGAGATTCGTGAACTAGGTTCTGGAACTTATGGGGCTGTCTATCATGGGAAATGGAAAGGTTCTGATGTGGCAATTAAGAGGATAAAAGCTAGCTGTTTTGCTGGAAGACCCTCAGAAAGAGAAAGATTGATTGCAGATTTCTGGAAAGAGGCATTGATACTAAGTTCACTTCATCACCCAAACGTTGTGTCCTTCTACGGTATTGTTCGTGATGGCCCTGATGGTTCTTTAGCAACTGTGACAGAGTTCATGATTAATGGATCCCTGAAACAGTTCTTGCATAAGAAAGATAGAACTATAGATCGTCGTAAGAGGCTAATTATAGCTATGGATGCGGCATTTGGGATGGAGTATTTGCATGGAAAGAACATTGTGCATTTTGATTTGAAATGTGAGAATCTATTAGTCAATATGAGAGATCCACAGCGGCCTGTCTGCAAGATTGGTGATTTGGGTTTATCAAAGGTAAAACAGCACACTCTAGTATCTGGAGGAGTGCGGGGAACTTTGCCATGGATGGCACCTGAACTCCTAAGTGGGAAAAGCAATATGGTGTCAGAGAAGGAGGTATTGTGA 3096 0.4215 MDSSTVIRPSTPCSGSAPGSAPGCNDDSQRVKFLCSFLGNIMPRPQDGKLRYVGGETRIVSVPRDIGYEELMSKMRELYDGAAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSSDGFHRLRIFLFSQSEQDVSSHFIDGDDRDTERRYVDALNNLNDASDFRKQQQGEFPMLGSVEDMHVADQFFNPINVDGGLHGQRSGEIPITHFNLHHPTLPHIGSAQHQQPISQRYSDIDAPWSSAYYSPRHHGHHDSRSVVEFPSSPSSARYQMPFSELPEKCIDRMPEEYTRHQVNHHPVYDNQPQYSDNVVWYPTGAASSEKSGFPSNVLHGPHVIDGSSICEHCRISFQRGQSHFEHPNINNGLPPVANPCAECHANRDTFIMNADAKLHPVIYPNEANNDHRSAYNDTQNHERGWALPHQTNNRVEEARSHVSGSGRLNDHYVLDGSGINYSLGHGNVADGHHLPSNYVHQRVGPELGPELFHDQAVTTTAHPQISPLEERSVRYGNPSPYGVDSHYPVTHGHVPGLTFWRNTAAPLHIGPSYEASSPPQQLNGVLSAGIRGEGSPRIYIGPDSQSPWVDSSHKMSGHDGLPVPEFPYPHAVKFNPRALGQENQHPVAVDTIHSPQDMNVGIRLEPVQLPKSPFNMVHNNEVSNNGTHITDAMGSLSLHDEEKGTENADKVENSNAQSISFSEQNKIAENNSEAAASLDSKNSKSKPVEECGEVTKLVDGDLIAPEDSKHLANQFSFLPELIASVKKAALEGAEEVKARAKEHTTSQNNSAIKDDTANEGETGNALGDLELDSDNDNVDTSKIEPTKAEAEAIARGLQTIKNCDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDGSLATVTEFMINGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKQHTLVSGGVRGTLPWMAPELLSGKSNMVSEKEVL 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0973 1031 ProSitePatterns Protein kinases ATP-binding region signature. 845 866 IPR017441 GO:0005524
Prci9g0973 1031 CDD PB1_UP2 34 130 - -
Prci9g0973 1031 SMART PB1_new 45 132 IPR000270 GO:0005515
Prci9g0973 1031 MobiDBLite consensus disorder prediction 1 23 - -
Prci9g0973 1031 PANTHER SERINE-THREONINE PROTEIN KINASE 87 1022 - -
Prci9g0973 1031 MobiDBLite consensus disorder prediction 702 716 - -
Prci9g0973 1031 ProSiteProfiles Protein kinase domain profile. 839 1031 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0973 1031 ProSitePatterns Serine/Threonine protein kinases active-site signature. 964 976 IPR008271 GO:0004672|GO:0006468
Prci9g0973 1031 SMART serkin_6 839 1031 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0973 1031 Gene3D Phosphorylase Kinase; domain 1 824 924 - -
Prci9g0973 1031 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 832 926 - -
Prci9g0973 1031 MobiDBLite consensus disorder prediction 702 723 - -
Prci9g0973 1031 MobiDBLite consensus disorder prediction 1 24 - -
Prci9g0973 1031 SUPERFAMILY Protein kinase-like (PK-like) 830 1022 IPR011009 -
Prci9g0973 1031 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 50 132 - -
Prci9g0973 1031 MobiDBLite consensus disorder prediction 771 811 - -
Prci9g0973 1031 SUPERFAMILY CAD & PB1 domains 47 139 - -
Prci9g0973 1031 Gene3D Transferase(Phosphotransferase) domain 1 925 1028 - -
Prci9g0973 1031 MobiDBLite consensus disorder prediction 777 791 - -
Prci9g0973 1031 Gene3D - 49 133 - -
Prci9g0973 1031 Pfam PB1 domain 46 131 IPR000270 GO:0005515
Prci9g0973 1031 Pfam Protein tyrosine and serine/threonine kinase 840 1021 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0973 Prci-Chr9 24362534 24368721 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0973 25 1028 MAP Kinase Kinase Kinase AT5G57610 53.405 0.0 946
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Prci9g0973 PK_Tyr_Ser-Thr 1.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0973 - - gmx:100779077 1473.37