Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0972 ATGGATAGTTCTACTGTAATTCGACCTTCTACACCCTGTTCTGGTTCTGCACCGGGTTCGGCGCCTGGTTGCAATGATGATAGCCAGCGGGTAAAATTCTTATGTAGTTTTCTAGGAAATATAATGCCCCGTCCCCAAGATGGGAAGCTTCGATATGTTGGTGGAGAGACGCGAATTGTGAGTGTTCCACGAGATATTGGTTATGAGGAGTTGATGAGTAAGATGAGGGAGCTCTATGATGGGGCAGCAGTCTTGAAATACCAGCAACCTGACGAGGATCTTGATGCCCTTGTCTCCGTTGTGAATGATGATGATGTGGTTAATATGATGGAAGAGTATGACAAATTGGGTTCAAGTGATGGATTCCATAGGCTCAGAATTTTTTTGTTCTCACAATCTGAACAAGATGTTTCTTCACATTTCATTGATGGGGATGACAGGGATACTGAGAGAAGGTATGTTGATGCATTGAATAATTTAAATGATGCTTCTGATTTTAGGAAGCAGCAACAAGGTGAGTTTCCTATGCTTGGTTCAGTTGAGGATATGCATGTAGCTGATCAGTTCTTTAATCCAATCAATGTGGATGGTGGCCTTCATGGCCAGAGAAGTGGTGAGATACCCATAACTCATTTTAACTTGCATCATCCCACACTACCTCACATCGGATCAGCACAGCACCAGCAACCTATATCCCAGAGGTATAGTGACATAGATGCTCCATGGAGTTCTGCATATTACTCTCCCAGGCATCATGGTCACCATGACTCTAGATCTGTGGTAGAATTTCCATCTTCTCCTTCTTCTGCAAGGTACCAGATGCCATTTTCAGAGCTACCAGAGAAATGCATTGATAGAATGCCCGAAGAATATACTCGGCATCAGGTAAATCACCATCCTGTGTATGACAATCAACCACAATATTCTGATAATGTTGTGTGGTATCCAACTGGAGCTGCATCTAGTGAGAAGTCAGGTTTTCCTAGCAATGTTCTTCATGGTCCTCATGTTATTGATGGGAGTAGTATTTGTGAGCACTGCCGGATAAGTTTTCAGAGAGGTCAATCACATTTTGAGCATCCTAATATTAATAATGGACTTCCACCAGTCGCTAATCCATGTGCAGAATGCCATGCAAACAGGGATACTTTTATAATGAATGCTGATGCAAAGTTGCATCCTGTTATTTATCCTAATGAGGCAAATAATGATCATAGATCTGCTTATAACGATACTCAAAATCATGAGAGAGGATGGGCTTTGCCACATCAAACAAATAATCGGGTTGAGGAAGCAAGGAGCCATGTTTCTGGATCAGGAAGATTGAATGATCATTATGTTCTTGATGGTTCTGGCATAAATTACTCTCTTGGCCATGGCAATGTGGCTGATGGGCATCATCTGCCTTCGAATTACGTTCACCAAAGAGTTGGACCTGAATTGGGACCTGAACTGTTTCATGATCAAGCTGTGACTACTACAGCCCATCCACAAATTTCTCCTTTGGAAGAACGCAGTGTGCGATATGGGAACCCATCTCCTTATGGAGTTGATAGTCATTACCCTGTGACACATGGACATGTACCTGGGCTTACTTTCTGGAGAAATACTGCAGCTCCACTTCACATTGGACCATCTTATGAGGCATCCAGTCCACCTCAGCAGTTAAATGGTGTGTTAAGTGCAGGAATAAGGGGAGAGGGTAGTCCAAGAATTTACATTGGACCAGATAGTCAAAGTCCTTGGGTTGATTCCTCGCACAAAATGTCAGGTCATGATGGATTACCAGTCCCAGAATTTCCTTATCCTCATGCTGTGAAGTTCAATCCAAGGGCTCTTGGTCAAGAAAATCAACATCCAGTTGCTGTGGACACCATTCATTCCCCACAGGACATGAATGTTGGCATTCGATTGGAACCAGTGCAGCTTCCAAAATCACCTTTTAATATGGTTCACAACAATGAGGTTTCTAACAATGGTACTCATATAACTGATGCAATGGGGTCGCTGAGCTTGCACGATGAAGAGAAAGGGACAGAGAATGCAGATAAGGTTGAGAACTCTAATGCTCAAAGTATATCTTTTTCTGAGCAAAACAAAATTGCTGAGAATAATAGTGAAGCAGCTGCTTCTCTTGACTCTAAAAATTCAAAATCAAAACCTGTTGAAGAATGTGGTGAGGTTACGAAACTTGTTGATGGGGATCTAATTGCTCCTGAAGATTCCAAGCATCTAGCTAACCAATTCAGTTTCTTGCCTGAGTTGATTGCTTCTGTAAAAAAGGCTGCATTGGAAGGAGCTGAAGAGGTGAAAGCTAGAGCTAAGGAGCACACCACGTCTCAGAATAATTCAGCAATCAAAGATGACACAGCAAATGAAGGAGAGACAGGGAATGCTCTTGGTGATTTAGAATTGGACTCTGATAACGACAATGTGGATACTTCTAAAATTGAACCTACAAAAGCTGAGGCAGAAGCTATTGCTAGAGGATTGCAGACAATTAAAAATTGTGATTTGGAAGAGATTCGTGAACTAGGTTCTGGAACTTATGGGGCTGTCTATCATGGGAAATGGAAAGGTTCTGATGTGGCAATTAAGAGGATAAAAGCTAGCTGTTTTGCTGGAAGACCCTCAGAAAGAGAAAGATTGATTGCAGATTTCTGGAAAGAGGCATTGATACTAAGTTCACTTCATCACCCAAACGTTGTGTCCTTCTACGGTATTGTTCGTGATGGCCCTGATGGTTCTTTAGCAACTGTGACAGAGTTCATGATTAATGGATCCCTGAAACAGTTCTTGCATAAGAAAGATAGAACTATAGATCGTCGTAAGAGGCTAATTATAGCTATGGATGCGGCATTTGGGATGGAGTATTTGCATGGAAAGAACATTGTGCATTTTGATTTGAAATGTGAGAATCTATTAGTCAATATGAGAGATCCACAGCGGCCTGTCTGCAAGATTGGTGATTTGGGTTTATCAAAGGTAAAACAGCACACTCTAGTATCTGGAGGAGTGCGGGGAACTTTGCCATGGATGGCACCTGAACTCCTAAGTGGGAAAAGCAATATGGTGTCAGAGAAGATTGATGTTTATTCATTCGGGATTGTTATGTGGGAATTGCTCACTGGGGATGAACCCTATGCTGATATGCATTGTGCTTCAATAATAGGAGGTATTGTGAACAACACATTACGTCCCCAAATCCCGACATGGTGTGATCCTGAGTGGAAGTCTCTAATGGAAAGTTGCTGGGCTTCTGATCCCACAGAGAGGCCATCCTTCTCAGAAATCTCAAAGAAGCTAAGGACTATGGCTGCGCAGATGAATGTGAAGTAG 3339 0.4232 MDSSTVIRPSTPCSGSAPGSAPGCNDDSQRVKFLCSFLGNIMPRPQDGKLRYVGGETRIVSVPRDIGYEELMSKMRELYDGAAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSSDGFHRLRIFLFSQSEQDVSSHFIDGDDRDTERRYVDALNNLNDASDFRKQQQGEFPMLGSVEDMHVADQFFNPINVDGGLHGQRSGEIPITHFNLHHPTLPHIGSAQHQQPISQRYSDIDAPWSSAYYSPRHHGHHDSRSVVEFPSSPSSARYQMPFSELPEKCIDRMPEEYTRHQVNHHPVYDNQPQYSDNVVWYPTGAASSEKSGFPSNVLHGPHVIDGSSICEHCRISFQRGQSHFEHPNINNGLPPVANPCAECHANRDTFIMNADAKLHPVIYPNEANNDHRSAYNDTQNHERGWALPHQTNNRVEEARSHVSGSGRLNDHYVLDGSGINYSLGHGNVADGHHLPSNYVHQRVGPELGPELFHDQAVTTTAHPQISPLEERSVRYGNPSPYGVDSHYPVTHGHVPGLTFWRNTAAPLHIGPSYEASSPPQQLNGVLSAGIRGEGSPRIYIGPDSQSPWVDSSHKMSGHDGLPVPEFPYPHAVKFNPRALGQENQHPVAVDTIHSPQDMNVGIRLEPVQLPKSPFNMVHNNEVSNNGTHITDAMGSLSLHDEEKGTENADKVENSNAQSISFSEQNKIAENNSEAAASLDSKNSKSKPVEECGEVTKLVDGDLIAPEDSKHLANQFSFLPELIASVKKAALEGAEEVKARAKEHTTSQNNSAIKDDTANEGETGNALGDLELDSDNDNVDTSKIEPTKAEAEAIARGLQTIKNCDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDGSLATVTEFMINGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKQHTLVSGGVRGTLPWMAPELLSGKSNMVSEKIDVYSFGIVMWELLTGDEPYADMHCASIIGGIVNNTLRPQIPTWCDPEWKSLMESCWASDPTERPSFSEISKKLRTMAAQMNVK 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0972 1112 Gene3D Phosphorylase Kinase; domain 1 824 924 - -
Prci9g0972 1112 PRINTS Tyrosine kinase catalytic domain signature 1029 1051 IPR001245 GO:0004672|GO:0006468
Prci9g0972 1112 PRINTS Tyrosine kinase catalytic domain signature 958 976 IPR001245 GO:0004672|GO:0006468
Prci9g0972 1112 PRINTS Tyrosine kinase catalytic domain signature 1073 1095 IPR001245 GO:0004672|GO:0006468
Prci9g0972 1112 PRINTS Tyrosine kinase catalytic domain signature 921 934 IPR001245 GO:0004672|GO:0006468
Prci9g0972 1112 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 927 1112 - -
Prci9g0972 1112 ProSitePatterns Protein kinases ATP-binding region signature. 845 866 IPR017441 GO:0005524
Prci9g0972 1112 CDD PB1_UP2 34 130 - -
Prci9g0972 1112 Pfam Protein tyrosine and serine/threonine kinase 840 1102 IPR001245 GO:0004672|GO:0006468
Prci9g0972 1112 SUPERFAMILY CAD & PB1 domains 47 139 - -
Prci9g0972 1112 SMART PB1_new 45 132 IPR000270 GO:0005515
Prci9g0972 1112 PANTHER SERINE-THREONINE PROTEIN KINASE 75 1104 - -
Prci9g0972 1112 MobiDBLite consensus disorder prediction 1 23 - -
Prci9g0972 1112 Gene3D - 49 133 - -
Prci9g0972 1112 MobiDBLite consensus disorder prediction 702 716 - -
Prci9g0972 1112 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 832 926 - -
Prci9g0972 1112 Gene3D Transferase(Phosphotransferase) domain 1 925 1112 - -
Prci9g0972 1112 ProSitePatterns Serine/Threonine protein kinases active-site signature. 964 976 IPR008271 GO:0004672|GO:0006468
Prci9g0972 1112 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 50 132 - -
Prci9g0972 1112 MobiDBLite consensus disorder prediction 702 723 - -
Prci9g0972 1112 MobiDBLite consensus disorder prediction 1 24 - -
Prci9g0972 1112 ProSiteProfiles Protein kinase domain profile. 839 1105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0972 1112 SMART serkin_6 839 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0972 1112 CDD STKc_MAP3K-like 845 1102 - -
Prci9g0972 1112 MobiDBLite consensus disorder prediction 771 811 - -
Prci9g0972 1112 SUPERFAMILY Protein kinase-like (PK-like) 833 1100 IPR011009 -
Prci9g0972 1112 MobiDBLite consensus disorder prediction 777 791 - -
Prci9g0972 1112 Pfam PB1 domain 46 131 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0972 Prci-Chr9 24362188 24368721 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0972 25 1112 MAP Kinase Kinase Kinase AT5G57610 55.755 0.0 1109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Prci9g0972 PK_Tyr_Ser-Thr 3.6e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0972 - - gmx:100779077 1628.61