Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0970 ATGGGTCGAGCTCCATGCTGTGACAAAGGGAACGTGAAGAAAGGACCTTGGTCTCCAGAAGAGGATGCTATACTCAAAGCCTATATCGACAGACATGGAACTGGTGGCAACTGGATTGCTCTTCCTCAAAAAATTGGGCTGAAGAGGTGTGGGAAAAGTTGCAGACTAAGATGGCTGAATTACCTGAGGCCTAATATCAAGCATGGTGGTTTCACAGAAGAAGAAGACAACATTATTAGCAGTCTCTACATTAGCATTGGCAGCAGGTGGTCCATTATTGCGGCTCAGCTTCCTGGAAGAACAGACAATGACATCAAGAATTATTGGAACACAAGACTGAAGAAGAAACTGCTTGGGAGGCACAAGAATCAGAACAGTGCAGATCAGGACAACTCTGATAATTCCGACCATACCCTCAGCAACTCAGCTCTAGAAAGGCTTCAACTTCACATGCAACTTCAAAACCCTAGTTTCTCCTACAACAATCCTTCCCTCTGGCCTAAATTGCATCCTCTCCAACAAAAACTGATCCACAACACCCTGCAATCCCTGAACCATGCCTCCGATTTCATAACCACACCGCAAAAAGATGATAATGAACTTTACAAACCAGCTTCTGCTAATACTACTGATCATGATGATGATGATGATGCAGTTCAACCAGAAGGTGTAAAGATCAGCAACCCGGAGAGCTCAGGTCCGGTGACCAGCCCGGCTGGCATGAGCCGGATTGATCAGTTTGATATGGGGATGGATCAAGTTTCTGCAATGCAAACTGAGCTTGATGACATTCTCATGAGTGGTTACGTGACACAGCAGCAGAAGCAGGAGGAGCAGGTAGGTGAATATGGTTGTTTCGGAGAGATCATGAGTGGTTCATCGAAGGACAATTTGAGCTGGTGGTCGTCCAATGATTTTGATGCCAAGTCAGCATCCTCGAACTCTTGGGATTCAACTACTAGCGGTAGTGATCCCCAGATTCTTCATCAGGGGATGTTTCAAGATTATGAACTAGGTTATATATTGTAG 1029 0.4529 MGRAPCCDKGNVKKGPWSPEEDAILKAYIDRHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFTEEEDNIISSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGRHKNQNSADQDNSDNSDHTLSNSALERLQLHMQLQNPSFSYNNPSLWPKLHPLQQKLIHNTLQSLNHASDFITTPQKDDNELYKPASANTTDHDDDDDAVQPEGVKISNPESSGPVTSPAGMSRIDQFDMGMDQVSAMQTELDDILMSGYVTQQQKQEEQVGEYGCFGEIMSGSSKDNLSWWSSNDFDAKSASSNSWDSTTSGSDPQILHQGMFQDYELGYIL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0970 342 Gene3D - 7 68 - -
Prci9g0970 342 CDD SANT 71 113 IPR001005 -
Prci9g0970 342 FunFam Transcription factor RAX3 7 68 - -
Prci9g0970 342 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Prci9g0970 342 MobiDBLite consensus disorder prediction 225 239 - -
Prci9g0970 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Prci9g0970 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Prci9g0970 342 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Prci9g0970 342 CDD SANT 16 62 IPR001005 -
Prci9g0970 342 Gene3D - 70 142 - -
Prci9g0970 342 SMART sant 13 64 IPR001005 -
Prci9g0970 342 SMART sant 67 115 IPR001005 -
Prci9g0970 342 PANTHER OS09G0431300 PROTEIN 1 280 - -
Prci9g0970 342 FunFam Transcription factor MYB36 70 139 - -
Prci9g0970 342 MobiDBLite consensus disorder prediction 119 138 - -
Prci9g0970 342 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Prci9g0970 342 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Prci9g0970 342 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Prci9g0970 342 MobiDBLite consensus disorder prediction 191 239 - -
Prci9g0970 342 MobiDBLite consensus disorder prediction 207 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0970 Prci-Chr9 24353854 24356107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0970 1 179 MYB Transcription Factor Family AT5G57620 76.289 7.53e-99 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci9g0970 Myb_DNA-binding 4.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0970 K09422 - gmx:100783440 380.178