Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0953 ATGGATTCGTCTTTAGAGGGTGTCCTGCTCGATCCATCTAAATGCAGCAAGTTGAGTATGGAAGAAAAAAGAGAACTTATCTATGAAATATCGAAGTCCCAGGGTGCATCAGAGATGTTACAGTCATGGAGCCGACAAGAGATTTTAAAAATCCTGTGTGCTGAGATGGGAAAAGAGAGGAAGTACACTGGCCTGACAAAGTTGAAAATCATAGAAAATCTTCTAAAAATTGTCTCTGAAAAGAAATCAGGAGGCCAGGAAATTACGAGAAATTTTGAACCACCACTTTATCCTCCTGCAAATGGGCAGAAACCTGCTAAAAGGCAGAGAAAAACAGAGAATCCGTCTCGGTTGCCTCTTCCAGCCAACAATGGTCTAGTCACTAATGGCAGTGGAGATTTAGGTAGTAGCACCACGTGCTGTAAAAATTCAGCTTGCAAAGCTACCCTAAGTCAAGCAGATGTATTTTGCAAAAGATGCTCGTGCTGCATTTGCTATCAATATGATGACAACAAAGATCCTAGCCTTTGGTTAATATGTAACTCTGACCCTCCATTTCGCGGTGTTTCTTGTGGCTTGTCATGCCATCTTGAATGTGCTATAAAACATGATGGTTCTGGCATTGGCAAAAATGGAGTGAATCCCAAGCTTGATGGTGGCTTCTACTGTCACTCATGTGGGAAAGCAAATGATTTGCTCGGATGTTGTAGAAAACAACTGTCAGTGGCAAAGTGTACCAGACGTGTGGACATTCTTTGCTATCGTGTCTCCTTGACCCAAAGACTTTTACAAGGCACCGAAAAGTATAAAAAACTTTATGAATTAATTAATGAGGCTGTGAAGAAACTTGAACCTGATGTTGGCCCATTGACTGGCTCACCAGTGAAGATTGGTAGGGGTATTGTGAATAGACTTTCATCAGGACCAGAGGTCCAGAAATTCTGTGGTTTTGCTTTGGAATTGCTGGATTCGTCACTTTCTGAAATGATCTTGCCTCGACCATCACCCAGTCTGTCAAGTCAAGATACAAAATTGGTCGCTTCAGATATGGTGAGATTTGAAGATGTCACTGCAACATCACTGACTGTAGTTTTGGGTTCTGAAAATTCATCTGGGGAAAATATTGTTGGTTACAGCTTGTGGCATCGTGCAGCTCATGATGTGGACTATCCCTTGGACCCAATTTGCACATTGCATCTACCAGACAGAAGGTTCAGTATCAGGGATCTAATTCCGTCCACAGAATACATCTTCAAAGTTGTTGTCTTCAATCATTCTAGGGAATTGGGCACGTATGAAGTCCATGTTTTAACCGAGCAAAGTGAGGAAGAAGCACCCAACTGCTCAACAACAGAAAGAAGTCAGAGCCCAGTGACAAACTGTAGCAGCCTTTCCAATCCTTCCTCAGTGGAAGATGAAACTAATAACAGTAATCCATTTTTTGACCAGACTGATAATAAAGTTGAGAATCATCTTGATCAAAAGGACACTGACAAGCTTGCTTCAGGAATATTATCCAATGATGCCACTAACTGTCCCAATAATGGAGAATTTAGACTTCCAACAGATGCTGATTCTTTGTCAGACAAGGAACATGCTGCAGGAACTGGTTCTGATGTGTTAAAGCTTGATGAAAAGCACTCACCAGAGGATCAAGTCACTGAGGACATGAGTACTGATAACGGACCTGATTCCCCAACTCAGACTGGGAGGGACTGCGTGCCATTAATAGGTAGCTCAGAGGCAGGCCTTCCCAATACTCCATGCAAGTTAGAAATGCTTAAGGATGATCTAGGAAGAAAAGGAAGACCTAAATCCAGTGGCAAGGCCAAGGATCAAGAAAATGGGCCTGCGAAGAGACAAGGTCCTCAAGATGGAAGCAAATCTAAGAATAGAAATGAGGAAAGTCAACAAGTTGAGGAGCGTGATGCAGACGGGTTTTCTTCTGATGGGGATTTTGAGTATTATGTGAAGGTGATTAGAAGGTTAGAGTGTGAAGGACATATAGAGAAGAACTTTAGGCAAAAATTTCTAACTTGGTACAGCTTGAGAGCAACACCCCAAGAAGTAAGGGTTGTGAAAGTATATATTGATACCTTTATTGAAGATCCATTATCTCTTGCAGAGCAGCTTGTGGACACCTTCTCAGACTGTATATCAAGCAAGAGAACATCGATGGTGCCGCCTGGGTTCTGCATGAAGCTTTGGCATTAG 2214 0.4228 MDSSLEGVLLDPSKCSKLSMEEKRELIYEISKSQGASEMLQSWSRQEILKILCAEMGKERKYTGLTKLKIIENLLKIVSEKKSGGQEITRNFEPPLYPPANGQKPAKRQRKTENPSRLPLPANNGLVTNGSGDLGSSTTCCKNSACKATLSQADVFCKRCSCCICYQYDDNKDPSLWLICNSDPPFRGVSCGLSCHLECAIKHDGSGIGKNGVNPKLDGGFYCHSCGKANDLLGCCRKQLSVAKCTRRVDILCYRVSLTQRLLQGTEKYKKLYELINEAVKKLEPDVGPLTGSPVKIGRGIVNRLSSGPEVQKFCGFALELLDSSLSEMILPRPSPSLSSQDTKLVASDMVRFEDVTATSLTVVLGSENSSGENIVGYSLWHRAAHDVDYPLDPICTLHLPDRRFSIRDLIPSTEYIFKVVVFNHSRELGTYEVHVLTEQSEEEAPNCSTTERSQSPVTNCSSLSNPSSVEDETNNSNPFFDQTDNKVENHLDQKDTDKLASGILSNDATNCPNNGEFRLPTDADSLSDKEHAAGTGSDVLKLDEKHSPEDQVTEDMSTDNGPDSPTQTGRDCVPLIGSSEAGLPNTPCKLEMLKDDLGRKGRPKSSGKAKDQENGPAKRQGPQDGSKSKNRNEESQQVEERDADGFSSDGDFEYYVKVIRRLECEGHIEKNFRQKFLTWYSLRATPQEVRVVKVYIDTFIEDPLSLAEQLVDTFSDCISSKRTSMVPPGFCMKLWH 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0953 737 Gene3D Immunoglobulins 347 463 IPR013783 -
Prci9g0953 737 MobiDBLite consensus disorder prediction 442 485 - -
Prci9g0953 737 MobiDBLite consensus disorder prediction 625 647 - -
Prci9g0953 737 MobiDBLite consensus disorder prediction 439 485 - -
Prci9g0953 737 Pfam PHD - plant homeodomain finger protein 141 260 IPR032881 -
Prci9g0953 737 SUPERFAMILY Fibronectin type III 351 426 IPR036116 GO:0005515
Prci9g0953 737 PANTHER VIN3-LIKE PROTEIN 2-RELATED 8 737 IPR044514 GO:0010048|GO:0040029
Prci9g0953 737 MobiDBLite consensus disorder prediction 555 574 - -
Prci9g0953 737 MobiDBLite consensus disorder prediction 523 554 - -
Prci9g0953 737 MobiDBLite consensus disorder prediction 593 618 - -
Prci9g0953 737 CDD FN3 351 424 IPR003961 GO:0005515
Prci9g0953 737 MobiDBLite consensus disorder prediction 504 647 - -
Prci9g0953 737 ProSiteProfiles Fibronectin type-III domain profile. 347 444 IPR003961 GO:0005515
Prci9g0953 737 CDD PHD_VIN3_plant 161 226 - -
Prci9g0953 737 MobiDBLite consensus disorder prediction 87 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0953 Prci-Chr9 24222542 24227425 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0953 1 476 PHD Gene Family AT4G30200 56.238 9.64e-165 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0953 - - gmx:100819331 1072.38