Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0952 ATGAAGTATATCCGGACCAGCAGCCTCAAGAGGCTTTTCTCCTTGCAACGACGCAGTTTCGAGGAGAAAGTTCCCACCGGCGATGAAAAAGACGAGAATTTGCTGGTTATTGCGGCCCAGGAACAACCTTCTCAGAGACCCACTTGGAAATGCTTCTCCTACGAAGAACTCTTTGACGCCACCAATGGCTTCAACTCAGATAATTTGGTCGGCAAAGGAGGCTACGCGCAGGTTTACAAGGGGACATTGAAAGATGGGTACGAGATTGCAGTGAAGAGGCTCACGAGAACTTCGAGCGATGAGAGGAAAGAGAAGGAGTTCTTGACAGAGATTGGCACAATCGGTCATGTTAACCATACAAATGTATTGCCTCTTCTGGGTTGTTGTATTGACAAGGGGCTTTACCTCGTCTTCGAGCTCTCATCCAAAGGCTCTGTCGCCTCTCTTCTTCATGATGAAAACGTGCCTCCTTTGGACTGGAAAACCAGATATAAGATAGTTCTGGGGACTGCACGTGGCCTCCATTACTTGCACAAAGGCTGCAAAAGGAGGATAATCCACAGGGACATCAAGTCCTCAAACATTCTATTAACGTCAGATTTTGAACCACAGATATCAGATTTTGGGCTGGCAAAATGGCTTCCGAATCAATGGACTCATCATTCCATAGCCCCAATAGAGGGAACATTTGGACATTTGGCACCAGAGTACTACTTACATGGAATAGTGGACGAGAAAACAGACGTGTTTGCTTTTGGGGTTTTCTTGCTCGAAGTCATCTCAGGCAGGAAACCGGTGGACGGCTCTCACCAAAGCTTACACAACTGGGCAAAACCATTGTTGAACAAAGAGGAATTAGAAAAGCTGGTAGATCAGAGGCTAGAAGGAGCCTACGATGTAGCTCAATTACAAAGACTTGCCTTTGCAGCTTCTCTCTGTATTCGAGCTTCTGCAACTTGGCGACCTACCATGAGCCAGGTATTGGAGGTGATGGAGGAAGGAGAAATGGACAAGGAGAAGTGGAAGATGCCAGAGGAAGAAGAAGAACAAGAAGAAGAATTCTGGGGATTTGAGGATCTGGAATATGAATATGAAAGTTCATTCTCTCTGTCTCTACCAGACTCCATTAGAAGCAGCTCATAA 1143 0.4611 MKYIRTSSLKRLFSLQRRSFEEKVPTGDEKDENLLVIAAQEQPSQRPTWKCFSYEELFDATNGFNSDNLVGKGGYAQVYKGTLKDGYEIAVKRLTRTSSDERKEKEFLTEIGTIGHVNHTNVLPLLGCCIDKGLYLVFELSSKGSVASLLHDENVPPLDWKTRYKIVLGTARGLHYLHKGCKRRIIHRDIKSSNILLTSDFEPQISDFGLAKWLPNQWTHHSIAPIEGTFGHLAPEYYLHGIVDEKTDVFAFGVFLLEVISGRKPVDGSHQSLHNWAKPLLNKEELEKLVDQRLEGAYDVAQLQRLAFAASLCIRASATWRPTMSQVLEVMEEGEMDKEKWKMPEEEEEQEEEFWGFEDLEYEYESSFSLSLPDSIRSSS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0952 380 ProSitePatterns Protein kinases ATP-binding region signature. 70 92 IPR017441 GO:0005524
Prci9g0952 380 Gene3D Phosphorylase Kinase; domain 1 35 140 - -
Prci9g0952 380 CDD STKc_IRAK 70 333 - -
Prci9g0952 380 SMART serkin_6 64 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0952 380 FunFam Putative receptor-like serine/threonine-protein kinase 31 140 - -
Prci9g0952 380 SUPERFAMILY Protein kinase-like (PK-like) 42 331 IPR011009 -
Prci9g0952 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Prci9g0952 380 ProSiteProfiles Protein kinase domain profile. 64 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0952 380 PANTHER OS08G0249100 PROTEIN 38 360 IPR046958 -
Prci9g0952 380 Gene3D Transferase(Phosphotransferase) domain 1 142 357 - -
Prci9g0952 380 Pfam Protein tyrosine and serine/threonine kinase 67 329 IPR001245 GO:0004672|GO:0006468
Prci9g0952 380 FunFam Putative receptor-like serine/threonine-protein kinase 142 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0952 Prci-Chr9 24199380 24203518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0952 52 327 Trihelix Transcription Factor Family AT1G68690 47.203 3.24e-73 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Prci9g0952 PK_Tyr_Ser-Thr 1.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0952 - - gmx:100305398 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g1441 4 11771961 11776494 Prci9g0952 9 24199380 24203518 CCT