Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0949 ATGATAATTGCTATTATAACAATAGCATACGCCATTCTTCAGTGCTTGAAGAAAGTAGGAACAATAATGTCAGCTTATACCCAGATTCCAACCACAGATAGAGATAATGACAACAATGATTCAATCTCACAACCTTCAGACAGCAACAAAGAAATCGAATTAGCAATGCCTTCAAATTTGAAAGTGAAGTTTGCAACTATGGAAAGATTCCTCAGCAACATCAAAAATGAAAAACCCATCAGATTCTCACGTGAGGAGCTTGAAGAAATCACAAAGAGCTACACCACTGTTTTGGGTTTTGGTGCTTATGGGGTGGTTTATAAAGGTGAATTGTCAAATGGAGAGAAAGTTGCAGTGAAAGTTCTCAACAGTTTGGATCTGGGCACAGAGGAGCAATTTAAAGCAGAGGTTAGCACTATTGGAAGAACTTACCATATCAATCTAGTTAGGCTTTATGGCTTCTGCTTCCAACATGACAAGAGAGCTCTTGTATATGAGTATGTTTCAAATGGTTCTCTCAATAATTTATTATTTGGCAATCTAAACAAAAAAGTTGAGTTGGGGAAGCTTCTAGAGATTGCCATAGGGACTGCAAAAGGAATTGCTTATTTACATGAGGAGTGTCAACACAGAATCATTCATTATGATATTAAGCCAGAGAATATACTTCTTGGCCTGAACTTGGAACCAAAAGTAGCAGATTTTGGTCTTGCAAAGCTTTGTAGCAGAGAAAGAAGCCAAGTGAATATGACACACTTCAGAGGAACAAGAGGGTATGCTGCACCAGAACTGTGGAAGCTTTGTCCTGTGAATCATAAGTGTGACGTTTATAGTTTTGGTATCGTTCTCTTTGAAATTGTGGGAAGAAGAAGGCACTTTGATAGTGACTATAGGGAATCACAACAATGGTTTCCAAAGTGGACATGGGATATGATTGAGAACAGTGAATTACCAATGATGCTTTCATTATATGGGATTGAAGAGAAAGACATGAAAAAAGCTGAGAGAATGTTAATGGTGGCTCTTTGGTGTGTTCAATATTTCCCTTCTGATAGACCTCTTATGAGTAATGTGGTGAAGATGTTGGAGGGTGATACAGAAATTCTTCCACCACCATTTCCCTTTCAGAATTTGGTGTCTTCTAAACCACATTTGACTTCAAAGGGAACCAGTGAAGATTCAGATGTTTCTACTTCATATGTGACAGAATCTTCTACACAATTTAATACTGAACTCTAG 1239 0.3777 MIIAIITIAYAILQCLKKVGTIMSAYTQIPTTDRDNDNNDSISQPSDSNKEIELAMPSNLKVKFATMERFLSNIKNEKPIRFSREELEEITKSYTTVLGFGAYGVVYKGELSNGEKVAVKVLNSLDLGTEEQFKAEVSTIGRTYHINLVRLYGFCFQHDKRALVYEYVSNGSLNNLLFGNLNKKVELGKLLEIAIGTAKGIAYLHEECQHRIIHYDIKPENILLGLNLEPKVADFGLAKLCSRERSQVNMTHFRGTRGYAAPELWKLCPVNHKCDVYSFGIVLFEIVGRRRHFDSDYRESQQWFPKWTWDMIENSELPMMLSLYGIEEKDMKKAERMLMVALWCVQYFPSDRPLMSNVVKMLEGDTEILPPPFPFQNLVSSKPHLTSKGTSEDSDVSTSYVTESSTQFNTEL 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0949 412 Gene3D Phosphorylase Kinase; domain 1 65 167 - -
Prci9g0949 412 PIRSF ILK 8 367 - -
Prci9g0949 412 SUPERFAMILY Protein kinase-like (PK-like) 74 363 IPR011009 -
Prci9g0949 412 ProSitePatterns Protein kinases ATP-binding region signature. 98 120 IPR017441 GO:0005524
Prci9g0949 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Prci9g0949 412 MobiDBLite consensus disorder prediction 384 412 - -
Prci9g0949 412 FunFam Putative receptor-like protein kinase 168 369 - -
Prci9g0949 412 Pfam Protein kinase domain 96 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0949 412 ProSiteProfiles Protein kinase domain profile. 92 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0949 412 FunFam S-receptor-like serine/threonine-protein kinase 62 167 - -
Prci9g0949 412 MobiDBLite consensus disorder prediction 29 48 - -
Prci9g0949 412 Gene3D Transferase(Phosphotransferase) domain 1 168 368 - -
Prci9g0949 412 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 72 372 - -
Prci9g0949 412 SMART serkin_6 92 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0949 Prci-Chr9 24165886 24167138 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0949 81 411 Receptor kinase-like Gene Family AT5G38280 41.716 5.40e-85 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Prci9g0949 Pkinase 7.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0949 - - pcin:129319695 815.453