Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0948 ATGGAGAAGTTTCTGAATGATATTGAATCAGGAAGGCCTATCAGATTCACCTCGCGCCACCTAACGCGTGCAACAAACAATTACTCCAACATGTTGGGCTCAGGAGGATTCGGATCAGTTTATAAAGGAACACTTGGTAATGGAACTGTTGTGGCAGTTAAAGTTCTACATAGTAGTGTTTCTGACAAGAGAATGGAAGAACAGTTCATGGCTGAAGTGAGCACAATTGGAAGAGTTCATCATTTCAATCTGGTTCGCCTCTTAGGATTCTGCATTGAAACTGATACGAGAGCTTTAGTTTATGAGTACATGTGCAATGGATCTCTTGACAAGTATCTGTTTTGTGAAAACAAGGCCTTAGGATTTGGGAAGCTTCATGAGATTGCTGTAGGAACGGCTAAAGGAATTGCTTACTTACATGAAGAATGCAACCAGAGGATTATCCACTACGACATTAAACCAGAAAACATCCTCTTGGACCATAATTTCTGTCCTAAAGTTGCTGATTTTGGTTTAGCGAAGCTCTATAACAGAGAAAAGTCCTGTGTTACTATGACAGGACTAAGAGGGACACCAGGATATGCTGCACCAGAACTTTGGATGCCTTTTCGTGTAACTCACAAGTGTGATGTTTTCAGCTTTGGAATGTTGTTATTTGAAATCATAGGAAGAAGAAGAAACCTTGACGTTAACCTCACAGAAAGTCAAGAGTGGTTTCCAAGACAGGTTTGGATAAAATTTGAGAGTGAAAAACTAGAAGAGCTGATAATAGACTATGGCATATTTGAAGATGAAGATAAAGAGATAGTGGAAAGAATGGCAAGACTAGCTTTCTGGTGTGTTCAATATAGACCAGAATTGAGACCCATAATGAGTGTTGTGGTGAAAATGTTGGAAGGCTCAATGGATATCCCAGATCCTTCAAACCCATTTCAACACTGGATGGAAGAAGATCATGCAACATTGGAAGCATCAGCACAAAAGGATATTAGTATCAATGTTGTTTCATCTAATCTTGAGGCATCAGAATCTTCCATTGCGTATGAGACCCATAGATTCTCTTTAGATGGAATCTTGCCATGCATGGTCTAG 1092 0.3974 MEKFLNDIESGRPIRFTSRHLTRATNNYSNMLGSGGFGSVYKGTLGNGTVVAVKVLHSSVSDKRMEEQFMAEVSTIGRVHHFNLVRLLGFCIETDTRALVYEYMCNGSLDKYLFCENKALGFGKLHEIAVGTAKGIAYLHEECNQRIIHYDIKPENILLDHNFCPKVADFGLAKLYNREKSCVTMTGLRGTPGYAAPELWMPFRVTHKCDVFSFGMLLFEIIGRRRNLDVNLTESQEWFPRQVWIKFESEKLEELIIDYGIFEDEDKEIVERMARLAFWCVQYRPELRPIMSVVVKMLEGSMDIPDPSNPFQHWMEEDHATLEASAQKDISINVVSSNLEASESSIAYETHRFSLDGILPCMV 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0948 363 SMART serkin_6 26 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0948 363 PIRSF TyrPK_CSF1-R 115 224 - -
Prci9g0948 363 PIRSF TyrPK_CSF1-R 268 355 - -
Prci9g0948 363 PIRSF TyrPK_CSF1-R 20 122 - -
Prci9g0948 363 PANTHER OS07G0415500 PROTEIN 3 311 - -
Prci9g0948 363 FunFam Putative receptor-like protein kinase 104 306 - -
Prci9g0948 363 Gene3D Transferase(Phosphotransferase) domain 1 104 309 - -
Prci9g0948 363 FunFam serine/threonine-protein kinase PBS1-like 2 103 - -
Prci9g0948 363 ProSitePatterns Protein kinases ATP-binding region signature. 32 54 IPR017441 GO:0005524
Prci9g0948 363 Pfam Protein kinase domain 30 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0948 363 CDD STKc_IRAK 32 300 - -
Prci9g0948 363 Gene3D Phosphorylase Kinase; domain 1 2 103 - -
Prci9g0948 363 SUPERFAMILY Protein kinase-like (PK-like) 10 299 IPR011009 -
Prci9g0948 363 ProSiteProfiles Protein kinase domain profile. 26 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0948 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0948 Prci-Chr9 24153992 24155277 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0948 15 325 Receptor kinase-like Gene Family AT5G38280 41.250 6.18e-77 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Prci9g0948 Pkinase 5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0948 - - pcin:129297340 499.59