Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0947 ATGTCACCTGAATCTACGAGACTGATCATTAGCTTGGTGTCAAGCGTGCTTCCGGTCACAATAATGATAACCATATATGTCTTCTATTGTAAAATATGTATGTACCAAAGGCGTAAACCAGCAAAAGTCGCAGAACTGGAAAGCGGGAACTCAAATGATCAGATTCTGACATATAGAATGGACAAGTTTCTCAATGATATTGAATCACAAAAGCCTATCAGATTCACCTCACATCACCTAACGCGTGCAACAAACAATTACTCCAACATGTTGGGCTCAGGAGGATTCGGATCAGTTTATAAAGGAACACTTCGTAATGGAACTATTGTGGCAGTGAAAGTTCTACGTAGTAGTGTTTCTGACAAGAGAATGGTAGAGCAGTTCATGGCTGAAGTGAGCACAATTGGACGAGTTCATCATTTCAATCTGGTTCGCCTCTTAGGATTTTGCATTGAAACTGATAAGAGGGCTTTGGTTTATGAGTACATGAGCAATGGATCTCTTGACAAGTACTTGTTTTCTAAAAACAAGATCTTAGGATTTGAGAAGCTTCATGAGATTGCTGTTGGAACGGCTAAAGGCATTGCTTACTTACATGAAGAATGCAACCAGAGGATTATCCACTACGACATTAAACCAGAAAACATTCTCTTGGACCATGATTTCTGTCCTAAAGTTTCTGATTTTGGTTTAGCCAAGCTCTGTAACAGGGAAAAGTCTTGTGTTACTATGACAGGACTAAGAGGGACACCAGGTTATGCTGCACCAGAACTTTGGATGCCTTTTCGTGTAACTCACAAGTGTGATGTTTTCAGCTTTGGAATGTTGTTATTTGAAATCATAGGAAGAAGAAGGAACCTTGACGTGAACCTCACAGAAAGTCAAGAGTGGTTTCCAAGACAGGTTTGGATAAAATTTGAGAGTGAAAATCTAGAAGAGCTGATAACAGATTGTGGTATACTTGAAGATAAAGAGAAAGTGGAAAGAATGGCAAGAATAGCTTTCTGGTGTGTTCAATATAGACCAGAATTGAGACCCATTATGAGTGTCGTGGTGAAAATGTTGGAAGGCTCAATGGATATCCCAAATCCTTCAAACCCATTTCAACACTTGATGGAAGAAGATCATGCAACATTGGAAGCAGCACAAAAGGATATTAGTATCGATGCTGTTTCATCTCTCGAGATATCCAAATCTTCCATTGTGTATGAGACCCGGACAGATTCTCTTTAG 1233 0.3958 MSPESTRLIISLVSSVLPVTIMITIYVFYCKICMYQRRKPAKVAELESGNSNDQILTYRMDKFLNDIESQKPIRFTSHHLTRATNNYSNMLGSGGFGSVYKGTLRNGTIVAVKVLRSSVSDKRMVEQFMAEVSTIGRVHHFNLVRLLGFCIETDKRALVYEYMSNGSLDKYLFSKNKILGFEKLHEIAVGTAKGIAYLHEECNQRIIHYDIKPENILLDHDFCPKVSDFGLAKLCNREKSCVTMTGLRGTPGYAAPELWMPFRVTHKCDVFSFGMLLFEIIGRRRNLDVNLTESQEWFPRQVWIKFESENLEELITDCGILEDKEKVERMARIAFWCVQYRPELRPIMSVVVKMLEGSMDIPNPSNPFQHLMEEDHATLEAAQKDISIDAVSSLEISKSSIVYETRTDSL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0947 410 Pfam Protein kinase domain 89 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0947 410 FunFam Putative receptor-like protein kinase 163 363 - -
Prci9g0947 410 CDD STKc_IRAK 91 357 - -
Prci9g0947 410 ProSiteProfiles Protein kinase domain profile. 85 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0947 410 PANTHER OS07G0415500 PROTEIN 11 368 - -
Prci9g0947 410 FunFam serine/threonine-protein kinase PBS1-like 57 162 - -
Prci9g0947 410 SMART serkin_6 85 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0947 410 Gene3D Phosphorylase Kinase; domain 1 59 162 - -
Prci9g0947 410 Gene3D Transferase(Phosphotransferase) domain 1 163 370 - -
Prci9g0947 410 ProSitePatterns Protein kinases ATP-binding region signature. 91 113 IPR017441 GO:0005524
Prci9g0947 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Prci9g0947 410 SUPERFAMILY Protein kinase-like (PK-like) 66 356 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0947 Prci-Chr9 24140819 24143227 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0947 75 360 Receptor kinase-like Gene Family AT1G66980 45.392 6.16e-80 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Prci9g0947 Pkinase 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0947 - - pcin:129297340 511.146