Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0944 ATGATGAGTCAACCCAGATTTGTCATTCTGAGATTAATTTGCTTATGCGCAGTGATTGTTGGCGTTATTATAATAGCTACCACGTCTGGATCGACAATCCCTATCATCATCAGCTCAGTTGTGGGTTTTTTCATGATAAAGATTGCCCTGGTGATTCTTAAAACTCGCAAGGACGGAGAGCGCGGAGATACAGAAGTGGCCATAAGACCGAATAGTGCGAATGCAGAGTTTTTGGCTCACACAGTGGATAAGTTCCTGAATGATATTGAAAAAGACAAGCCAATCAGATTCACCTCACATCAGCTAATGCTTGCAACTAACAACTACTCTAACAAGTTGGGCTCAGGAGGATTCGGTGCCGTCTATAGAGGGGTCCTAGTAGATGGATCCATTGTCGCAGTGAAGGTCCTGCATCAGATTTCTGATCACCAGAGAATAGAGGACCAGTTCATGGCAGAAGTGGGCACAATTGGAAGAGTTCATCATTTGAATCTGGTTCGTCTTTTTGGATTTTGCTTTGAAAACAACATGAGGGCTCTAGTGTATGAGTACATGAGCAATGGTTCTCCTGACAAGTATTTGTTTCGTGAAAACAATATCTTAGCGTTCCAAAAGCTTCATGAGATTGCAGTTGGGACTGCAAAAGGGATGGCTTACTTGCATGAAGAATGCCAGCAAAGAATCATCCATTACGACATAAAGCCGGAAAACATTCTTTTGGATCAAAACTTCTGTCCCAAGGTTGCTGACTTCGGTTTAGCCAAGATTTTCAACAGGGAAAAGTCTCACGTCACGATGACAGGATTGAGAGGGACACCTGGTTATGCTGCACCAGAACTTTGGCTGCCATTTCCGGTAACGCACAGGTGCGACGTTTATAGTTTTGGAATGTTGTTATTTGAAATCATAGGTAGGAGAAGGAACCATGATATGAACCTTCCAGAAAGTCAAGAATGGTTTCCGAGACAGGTTTGGGCAAAATTTAATAGTGGAAAGTTAGAAGAGTTGACAATAGGTTGTGGGATAACAGATAAAGAGATAGTTGAAAGAATGTCAAAGGTGGCTCTTTGGTGTGTTCAGTACAGACCAGAATTGAGACCCATGATGAGTGTTGTGGCAAAAATGTTGGAAGGTTTGATGGATATTCCAAACCCTTCGAACCCTTTTCAGCATCTCATGGATGAAGATCACTCTATTCAATCTTCCAATTGA 1212 0.4216 MMSQPRFVILRLICLCAVIVGVIIIATTSGSTIPIIISSVVGFFMIKIALVILKTRKDGERGDTEVAIRPNSANAEFLAHTVDKFLNDIEKDKPIRFTSHQLMLATNNYSNKLGSGGFGAVYRGVLVDGSIVAVKVLHQISDHQRIEDQFMAEVGTIGRVHHLNLVRLFGFCFENNMRALVYEYMSNGSPDKYLFRENNILAFQKLHEIAVGTAKGMAYLHEECQQRIIHYDIKPENILLDQNFCPKVADFGLAKIFNREKSHVTMTGLRGTPGYAAPELWLPFPVTHRCDVYSFGMLLFEIIGRRRNHDMNLPESQEWFPRQVWAKFNSGKLEELTIGCGITDKEIVERMSKVALWCVQYRPELRPMMSVVAKMLEGLMDIPNPSNPFQHLMDEDHSIQSSN 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0944 403 SUPERFAMILY Protein kinase-like (PK-like) 91 377 IPR011009 -
Prci9g0944 403 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 31 386 - -
Prci9g0944 403 FunFam Putative receptor-like protein kinase 185 384 - -
Prci9g0944 403 Gene3D Phosphorylase Kinase; domain 1 81 184 - -
Prci9g0944 403 Pfam Protein kinase domain 110 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0944 403 SMART serkin_6 107 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0944 403 ProSiteProfiles Protein kinase domain profile. 107 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0944 403 Gene3D Transferase(Phosphotransferase) domain 1 185 391 - -
Prci9g0944 403 FunFam serine/threonine-protein kinase PBS1-like 79 184 - -
Prci9g0944 403 ProSitePatterns Protein kinases ATP-binding region signature. 113 135 IPR017441 GO:0005524
Prci9g0944 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0944 Prci-Chr9 24127196 24129726 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0944 96 385 Receptor kinase-like Gene Family AT5G38280 41.584 3.03e-74 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Prci9g0944 Pkinase 7.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0944 - - pcin:129297340 731.865