Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0943 ATGTCATCTTTAAAGAAACGAATAATCATTGGCACTATCACCTCAGCTGTGATTGTTACCATATTAACAGCTAACCCATCCTTCCGTGTACCGCCAATAATCTCTATCCTCGTCGGCACAACTGCAGCAAGTACCATAATAATAGTTATCAGTTGGGTTCTTATTAAAAAATATAAGCACCAAAGGAGAAATAATCCTGCACAAGTTGCAGATGAAGGAGATAGTGCAATAAACACACAGTTTGTAACATATAGGGTGGATAGATTTCTGAATGATATTGAAAAAGAGAAGCCAATCAGGTTCAGCTCAAAACATCTCATGCTTGCAACTAACAACTACAACAACATTCTGGGATCAGGAGGATTTGGAGCAGTTTATAAAGGAGCTCTTAATGATGGAACCATTGTGGCAGTGAAAGTTCTGCATGCCATTTCAAACAAGAGAATAGAGGAACAGTTCATGGCAGAAGTGGGTACAATTGGAAGAGTTCATCATTTCAATCTAGTTCGTCTCTTTGGATTTTGCTTTGAAAAGAATATGAGGGCTCTGGTTTATGAGTACATGAGTAATGGCTCTCTTGACAAGTATTTGCTTGGCGAAAAAAGTCTCTTGGCATTTGAAAAGCTCCATGAGATTGCAGTTGGAACAGCTAAAGGTATTGCTTACTTGCATGAAGAATGCCAACAAAGAATCATCCATTATGACATAAAGCCAGAAAACATCCTATTAGATCAAAATTTCTGTCCTAAGGTTGCTGATTTTGGTTTAGCCAAGCTTTATAACAGGGAAAAATCTCACATTACAGTGACAGGATTGAGAGGGACACCTGGTTATGCTGCACCAGAGCTTTGGATGCCATTTCCTATAACCCACAAATGCGATATTTATAGTTTTGGAATGCTGTTATTTGAAATCATAAGTAGGAGAAGGAATGTTGATAAGAAAGTCACAGAGAGTGAACAATGGTTTCCAAAACTAGTTTGGATAAACTTTGAGTGTGGGAAACTAAAAGAGTTGATAGCATTATGTGGGATAGAGGAGAAGGATAAGGAGATGGCAGAAAGAATGATTAAGATAGCTCTTTGGTGTGTTCAGTATAAATCTGATTTAAGACCCATGATGAGTGATGTGGTGAAAATGTTGGAGGGTTTGATAGATATTCCTGAATGCCCTTCAAACCCTTTTCAACACTTAATGGATGATTCAGTTGATTCAAGCTGGTCTCTTGAAGTAACAAAGTCTCAAATTGATGGTACAGCCCCTATCATGAGAAAGTGTGAGATCGAAATAAACGCTTTAGATGGAAATACATCTTCCCTTTATTCGGATTCTTCCCATGGTTAA 1344 0.3795 MSSLKKRIIIGTITSAVIVTILTANPSFRVPPIISILVGTTAASTIIIVISWVLIKKYKHQRRNNPAQVADEGDSAINTQFVTYRVDRFLNDIEKEKPIRFSSKHLMLATNNYNNILGSGGFGAVYKGALNDGTIVAVKVLHAISNKRIEEQFMAEVGTIGRVHHFNLVRLFGFCFEKNMRALVYEYMSNGSLDKYLLGEKSLLAFEKLHEIAVGTAKGIAYLHEECQQRIIHYDIKPENILLDQNFCPKVADFGLAKLYNREKSHITVTGLRGTPGYAAPELWMPFPITHKCDIYSFGMLLFEIISRRRNVDKKVTESEQWFPKLVWINFECGKLKELIALCGIEEKDKEMAERMIKIALWCVQYKSDLRPMMSDVVKMLEGLIDIPECPSNPFQHLMDDSVDSSWSLEVTKSQIDGTAPIMRKCEIEINALDGNTSSLYSDSSHG 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0943 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Prci9g0943 447 FunFam Putative receptor-like protein kinase 188 389 - -
Prci9g0943 447 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 34 391 - -
Prci9g0943 447 ProSiteProfiles Protein kinase domain profile. 111 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0943 447 FunFam serine/threonine-protein kinase PBS1-like 84 187 - -
Prci9g0943 447 SUPERFAMILY Protein kinase-like (PK-like) 96 382 IPR011009 -
Prci9g0943 447 SMART serkin_6 111 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0943 447 Gene3D Phosphorylase Kinase; domain 1 87 187 - -
Prci9g0943 447 Pfam Protein kinase domain 115 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0943 447 Gene3D Transferase(Phosphotransferase) domain 1 188 392 - -
Prci9g0943 447 CDD STKc_IRAK 117 384 - -
Prci9g0943 447 ProSitePatterns Protein kinases ATP-binding region signature. 117 139 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0943 Prci-Chr9 24120290 24123865 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0943 100 403 Receptor kinase-like Gene Family AT5G38280 41.026 6.27e-79 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Prci9g0943 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0943 - - pcin:129297340 516.153