Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0896 ATGCGGCATAGTGAGAAGAATGTAAATCTCAGAGGATCTGGAAAATACAAACATTCAAATGCACAATCTGAGTTGAAGCCATGCTCATCATTGAGATTCAAAACCTGCAGCCCAAAATCCCAAGTGAAGAAGCATAAATTAAAACCAAAATCTCATTCACATAGAGTTGGCGCAAATACATCAAGGAAGGCAGTCACTGACTCTTCTAAGGAGGACCCAAGCAAGGAATTTTCAAGTAAAAACTTGATCATTAGAAAAGGTCTACATAAAACCGATGGAAATCCATCACAGAAGCCCGGCTCATCAAAGCCTCAAAGTGAAAAAGCTTCTCTTGGCTCTAAGAAAGAGGGTAAAGATGTTGATGGGGAGGTAAATATTCAGAAGCTTAAAAGGAGAAGGAGAAAAAAGAAAAGTCAAAGAAACAGTGTGGATCCTGATGATGCTTCACGCCTGCAGAGGAGACTAAGGTATCTTCTAATTAAAATAAAGCGGGAGCAGAACCTTATTGATGCTTATTCTGGAGAAGGTTGGAAAGGTCAGAGTCAAGAGAAGATCAAGCCAGAAAAGGAGTTGCTAAGAGCTCGGAAGCAGATTTTACACTGTAAGCTTAGTATTCGGGATGCCATTCACCAGTTGGATACTCTTAGTTCGGTGGGTAGCATTGAGGGCTCTGTCATTGCTCCAGATGGATCTGTTTACCATGAACATATATTCTGTGCAAAGTGCAAATTGCGTGAAGCTTTCCCTGATAATGATATTATACTTTGTGATGGCACCTGTAACCGTGCTTTTCACCAAAAATGTCTTGATCCTCCGTTGGACACTGAAAACATTCCTCCTGGAGATCAGGGCTGGTTTTGCGAGTTTTGTGAATGTAAGATGGAAATATTGGAGGCAATAAATGCACATCTTGGGACACATTTCTCCCTAGACAGCACTTGGCAGGATGTATTCAAGGAAGAAGCTTCCACACCTGATGGTGATACTAGTTTACTGAATCCAGAAGAAGAATGGCCATCAGATGATTCTGATGATGATGATTATAATCCTGAAAGGAGAGAGGATAGTCACAATTTCAGTGCAGAGGATATTGATGGTGATGCGCCTGATGATTCAGGCAGTTCTACCAGTCTATGGAATTCAGACGATGGATGTTCTCCTGGAACAGGAAAGGAAAGCATTGACCATGAATTTTTCTGTGTAAATAGTTGCATGGATTCTGATGAATCTGGAGAGATAGCATGTGGCCGGAGGCAGCGAAAAGCAGTTGACTACAAGAAACTATATGATGAAATGTTTGGGAAGGATGCTCCCGCACTTGAACAAGTTAGTGAAGATGAAGACTGGGGTCCAGGCAGAAGAAAGCGAAGAGAAAAAGAATCTGATGTTGCGAATACTCTGATGACTCTCCATGAAAGTGACAACAGATGTTCCAATAACGTGCAGAATGTGATGAAGGAATTTTCTTCAGACATGCAGTGTAAAAGGCCTTGTTTCAGGCTTCCACGCCATGCAGTTGAGAAGCTTCGCCAGGCTTTTTCAGAGAATGAACTTCCTCCAAGATCCGTGAAGGAGGGTCTTTCAAAAGAGTTGGGACTAGATGCTGATAAGGTTAGCAAATGGTTCAAAAATGCACGTTACTTAGCACTTAAAGCCAGAAAGCAAGCAGAAGGAGTAGAACAACCTCAAAGCACTGCTTCTAGAAACCCAAAAGATTCTAGTTTGCAACATCTGGAGATAGAGAATTTGACATCAAAAGAAACCTCAAAAGTAACTGTGACTGACACCCAGATGAATGTCGCGAATGACAGCCACAAAAGGCACTTAAAGTCGTCCCGCGGTAATCCTCTGAAGAAAAGGAAGCAAGTGATATCTCCACTTCAACCAAAACAAAATGGCAACAAGGACTTGGTGGAGTTCAGTGACGATGTTAGCTTGAAGAAACTTTTGGAAGCAAAAAAGAGGAAAGTAACTTATAATTTTGAAGGAGACTCTGAAGCAGCAGAGTTAGAATTTGGAAGACTTAGCAAACTGAAGAATAGAGTAGAGAATATGAAGCAAAAAATTATTAAAATCAGAAGTCACACAAAACAACCCCAATCCAAAGAACCCTCGGTTATATATGTACCCGTAGCTGAGTTAAAAGAAAAAAGTTGA 2157 0.4108 MRHSEKNVNLRGSGKYKHSNAQSELKPCSSLRFKTCSPKSQVKKHKLKPKSHSHRVGANTSRKAVTDSSKEDPSKEFSSKNLIIRKGLHKTDGNPSQKPGSSKPQSEKASLGSKKEGKDVDGEVNIQKLKRRRRKKKSQRNSVDPDDASRLQRRLRYLLIKIKREQNLIDAYSGEGWKGQSQEKIKPEKELLRARKQILHCKLSIRDAIHQLDTLSSVGSIEGSVIAPDGSVYHEHIFCAKCKLREAFPDNDIILCDGTCNRAFHQKCLDPPLDTENIPPGDQGWFCEFCECKMEILEAINAHLGTHFSLDSTWQDVFKEEASTPDGDTSLLNPEEEWPSDDSDDDDYNPERREDSHNFSAEDIDGDAPDDSGSSTSLWNSDDGCSPGTGKESIDHEFFCVNSCMDSDESGEIACGRRQRKAVDYKKLYDEMFGKDAPALEQVSEDEDWGPGRRKRREKESDVANTLMTLHESDNRCSNNVQNVMKEFSSDMQCKRPCFRLPRHAVEKLRQAFSENELPPRSVKEGLSKELGLDADKVSKWFKNARYLALKARKQAEGVEQPQSTASRNPKDSSLQHLEIENLTSKETSKVTVTDTQMNVANDSHKRHLKSSRGNPLKKRKQVISPLQPKQNGNKDLVEFSDDVSLKKLLEAKKRKVTYNFEGDSEAAELEFGRLSKLKNRVENMKQKIIKIRSHTKQPQSKEPSVIYVPVAELKEKS 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0896 718 MobiDBLite consensus disorder prediction 321 388 - -
Prci9g0896 718 MobiDBLite consensus disorder prediction 1 148 - -
Prci9g0896 718 Gene3D - 494 559 - -
Prci9g0896 718 SUPERFAMILY Homeodomain-like 495 560 IPR009057 -
Prci9g0896 718 ProSiteProfiles Zinc finger PHD-type profile. 236 293 IPR019787 -
Prci9g0896 718 ProSitePatterns Zinc finger PHD-type signature. 239 290 IPR019786 -
Prci9g0896 718 MobiDBLite consensus disorder prediction 38 57 - -
Prci9g0896 718 CDD PHD_PRHA_like 238 290 IPR045876 -
Prci9g0896 718 MobiDBLite consensus disorder prediction 94 108 - -
Prci9g0896 718 MobiDBLite consensus disorder prediction 370 387 - -
Prci9g0896 718 SMART PHD_3 238 291 IPR001965 -
Prci9g0896 718 SMART HOX_1 494 556 IPR001356 GO:0003677
Prci9g0896 718 Coils Coil 675 695 - -
Prci9g0896 718 MobiDBLite consensus disorder prediction 350 364 - -
Prci9g0896 718 MobiDBLite consensus disorder prediction 13 37 - -
Prci9g0896 718 MobiDBLite consensus disorder prediction 65 87 - -
Prci9g0896 718 MobiDBLite consensus disorder prediction 439 461 - -
Prci9g0896 718 MobiDBLite consensus disorder prediction 335 349 - -
Prci9g0896 718 Pfam Homeodomain 503 547 IPR001356 GO:0003677
Prci9g0896 718 SUPERFAMILY FYVE/PHD zinc finger 230 296 IPR011011 -
Prci9g0896 718 Pfam PHD-finger 238 293 IPR019787 -
Prci9g0896 718 MobiDBLite consensus disorder prediction 109 128 - -
Prci9g0896 718 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 45 717 - -
Prci9g0896 718 ProSiteProfiles 'Homeobox' domain profile. 492 552 IPR001356 GO:0003677
Prci9g0896 718 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 230 287 IPR013083 -
Prci9g0896 718 FunFam pathogenesis-related homeodomain protein 494 558 - -
Prci9g0896 718 CDD homeodomain 495 555 IPR001356 GO:0003677
Prci9g0896 718 FunFam pathogenesis-related homeodomain protein-like 230 290 - -
Prci9g0896 718 MobiDBLite consensus disorder prediction 558 589 - -
Prci9g0896 718 MobiDBLite consensus disorder prediction 553 589 - -
Prci9g0896 718 MobiDBLite consensus disorder prediction 603 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0896 Prci-Chr9 23653733 23660828 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0896 141 596 Homeobox Transcription Factor Family AT4G29940 56.034 1.03e-159 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Prci9g0896 Homeodomain 1.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0896 - - gmx:100816912 860.522