Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0894 ATGTCTTCGATCTTGACTGGAGCAGGTGGTGGAAGAACCTACGGGTTCGACTTCGATTTCGTGAAATCTCCATCTCCGTCGATCCGACCTTCTCATACATCTTCATCGTCTACTTCTTCGACTTCTTCAACAATATCTGAATCCAGCAATTCCCCTTTAGCAATCTCCACCAGAAAATCTCGAGCTCCTCGAAAGAGACCAAATCAAACCTACAATGAAGCTGCTGCTCTGTTATCTACGGCCTATCCCAATCTCTTCTCCAATAAGAACCTCAAAAAACCAGGCGAATTCTCCCGACCTAGTGATGCTGCTTTTCTGGACGAATCCGCTGAGGAATTGTTCTTGCCTTTCAGAGTCTTCGACGATTCTGCCTCCTCTTTCCTTCTCCAACAACAAATTCAGCACAAATCTAGTTCTCTAATGGAGCCTAAAGTGGTGAATCTGCAAGAGAAGTCGTGCCAGAGTCCCGGGGAAATTATCTCAAGAGTGAATTTGCTGGAATTGGACGATGATTGCGAAGAAGATTTCGATGCCGAATCTATTCTCGATGAGGAGATGGACGAGGGAATCGATAGCATCATTGGAAGCAGAACTGAAGAAGATTCCAATGATGCATCCTGTCACGGTGACAGAGGGAAAAATTGGAGCGTGGATTCCTCAGGATTCGGATTTGGCTCAAAATTCGATTTCCGGCTAGGGCTGGTGAAGGCTCTCCGGCGTGTCGATGACAGCAATTGGTGGAATTTCCCGGCGGTTGACATAGTGGAAATCTCGCCAAGAATCAACAAGCATACATCGTCGTTTGCTCCGCCGGCGGATAAGGAGAAGAAGAAGAAGACGACGACGACGAAGAAGGTGGCTGAGAAAACTAAGGTGAAATCTCTCAGAGGAATTTCGATTCCGAAATCGAAGGCTTCGAAATTGATGTTGAAATTGAACTACGACGACGTTTTGAGTGCTTGGTCAGACCGAGGGTCACCGTTTGCCGACAGAAGTCATTGCTCCGATTTACCGGGAAATGATGCCAATGCCCTAGCGGCCCAAATAGATTTGGTGACAAACATAGGAGGAGTGAGAGAAGCATGTGTGATGCGCTACAAAGAAAAGCGGCTTGCACGGCTCGTCTCTAAGAAGATCAGATATCAAGTCAGAAAAGTCAACGCTGATCAACGGCCCAGGATGAAGCTTGTTTGTGATATGGCAGGGGCGATTTGTGAGGAGGTCCAATTATAG 1233 0.4696 MSSILTGAGGGRTYGFDFDFVKSPSPSIRPSHTSSSSTSSTSSTISESSNSPLAISTRKSRAPRKRPNQTYNEAAALLSTAYPNLFSNKNLKKPGEFSRPSDAAFLDESAEELFLPFRVFDDSASSFLLQQQIQHKSSSLMEPKVVNLQEKSCQSPGEIISRVNLLELDDDCEEDFDAESILDEEMDEGIDSIIGSRTEEDSNDASCHGDRGKNWSVDSSGFGFGSKFDFRLGLVKALRRVDDSNWWNFPAVDIVEISPRINKHTSSFAPPADKEKKKKTTTTKKVAEKTKVKSLRGISIPKSKASKLMLKLNYDDVLSAWSDRGSPFADRSHCSDLPGNDANALAAQIDLVTNIGGVREACVMRYKEKRLARLVSKKIRYQVRKVNADQRPRMKLVCDMAGAICEEVQL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0894 410 Pfam CCT motif 359 395 IPR010402 GO:0005515
Prci9g0894 410 MobiDBLite consensus disorder prediction 266 285 - -
Prci9g0894 410 MobiDBLite consensus disorder prediction 26 57 - -
Prci9g0894 410 MobiDBLite consensus disorder prediction 269 285 - -
Prci9g0894 410 ProSiteProfiles CCT domain profile. 359 401 IPR010402 GO:0005515
Prci9g0894 410 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 13 395 - -
Prci9g0894 410 MobiDBLite consensus disorder prediction 25 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0894 Prci-Chr9 23626000 23630953 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0894 265 395 C2C2-CO-like Transcription Factor Family AT1G68520 36.478 1.09e-16 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci9g0894 CCT 1.9e-11 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0894 - - aprc:113845796 395.971