Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0893 ATGTCTTCGATCTTGACTGGAGCAGGTGGTGGAAGAACCTACGGGTTCGACTTCGATTTCGTGAAATCTCCATCTCCGTCGATCCGACCTTCTCATACATCTTCATCGTCTACTTCTTCGACTTCTTCAACAATATCTGAATCCAGCAATTCCCCTTTAGCAATCTCCACCAGAAAATCTCGAGCTCCTCGAAAGAGACCAAATCAAACCTACAATGAAGCTGCTGCTCTGTTATCTACGGCCTATCCCAATCTCTTCTCCAATAAGAACCTCAAAAAACCAGGCGAATTCTCCCGACCTAGTGATGCTGCTTTTCTGGACGAATCCGCTGAGGAATTGTTCTTGCCTTTCAGAGTCTTCGACGATTCTGCCTCCTCTTTCCTTCTCCAACAACAAATTCAGCACAAATCTAGTTCTCTAATGGAGCCTAAAGTGGTGAATCTGCAAGAGAAGTCGTGCCAGAGTCCCGGGGAAATTATCTCAAGAGTGAATTTGCTGGAATTGGACGATGATTGCGAAGAAGATTTCGATGCCGAATCTATTCTCGATGAGGAGATGGACGAGGGAATCGATAGCATCATTGGAAGCAGAACTGAAGAAGATTCCAATGATGCATCCTGTCACGGTGACAGAGGGAAAAATTGGAGCGTGGATTCCTCAGGATTCGGATTTGGCTCAAAATTCGATTTCCGGCTAGGGCTGGTGAAGGCTCTCCGGCGTGTCGATGACAGCAATTGGTGGAATTTCCCGGCGGTTGACATAGTGGAAATCTCGCCAAGAATCAACAAGCATACATCGTCGTTTGCTCCGCCGGCGGATAAGGAGAAGAAGAAGAAGACGACGACGACGAAGAAGGTGGCTGAGAAAACTAAGGTGAAATCTCTCAGAGGAATTTCGATTCCGAAATCGAAGGCTTCGAAATTGATGTTGAAATTGAACTACGACGACGTTTTGAGTGCTTGGTCAGACCGAGGGTCACCGTTTGCCGACAGAAGTCATTGCTCCGATTTACCGGGAAATGATGCCAATGCCCTAGCGGCCCAAATAGATTTGGTGACAAACATAGGAGGAGTGAGAGAAGCATGTGTGATGCGCTACAAAGAAAAGCGGCTTGCACGGCTCGTCTCTAAGAAGATCAGATATCAAGTCAGAAAAGTCAACGCTGATCAACGGCCCAGGATGAAGGGGCGATTTGTGAGGAGGTCCAATTATAGCTCAAATCCACACCGATGA 1233 0.4704 MSSILTGAGGGRTYGFDFDFVKSPSPSIRPSHTSSSSTSSTSSTISESSNSPLAISTRKSRAPRKRPNQTYNEAAALLSTAYPNLFSNKNLKKPGEFSRPSDAAFLDESAEELFLPFRVFDDSASSFLLQQQIQHKSSSLMEPKVVNLQEKSCQSPGEIISRVNLLELDDDCEEDFDAESILDEEMDEGIDSIIGSRTEEDSNDASCHGDRGKNWSVDSSGFGFGSKFDFRLGLVKALRRVDDSNWWNFPAVDIVEISPRINKHTSSFAPPADKEKKKKTTTTKKVAEKTKVKSLRGISIPKSKASKLMLKLNYDDVLSAWSDRGSPFADRSHCSDLPGNDANALAAQIDLVTNIGGVREACVMRYKEKRLARLVSKKIRYQVRKVNADQRPRMKGRFVRRSNYSSNPHR 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0893 410 ProSiteProfiles CCT domain profile. 359 401 IPR010402 GO:0005515
Prci9g0893 410 MobiDBLite consensus disorder prediction 266 285 - -
Prci9g0893 410 MobiDBLite consensus disorder prediction 26 57 - -
Prci9g0893 410 MobiDBLite consensus disorder prediction 269 285 - -
Prci9g0893 410 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 13 404 - -
Prci9g0893 410 MobiDBLite consensus disorder prediction 25 68 - -
Prci9g0893 410 Pfam CCT motif 359 401 IPR010402 GO:0005515
Prci9g0893 410 MobiDBLite consensus disorder prediction 390 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0893 Prci-Chr9 23626000 23631024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0893 265 403 C2C2-CO-like Transcription Factor Family AT1G68520 38.323 8.73e-21 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci9g0893 CCT 5.9e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0893 - - qsa:O6P43_022368 409.838