Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0861 ATGACTATGACACGGATAGTTGATGAACCTTCTGAAGGCTTCATTTCCTATAACAGAATGCCTCGCCGAGCAATTGAAGTGGCATCTCCTTGTTCTTCTCAGAATATTCAAGCTTCATCCCTTCACACTTCTGAAGGATTGTTCTTTTTCTTTGGAGGGATAGTAGTGCTCATCATATTGCTGATTCTTATATTTGTGTTTCGGAATCATATTAAACCGGCAAAGCTTATGAAAATGATAGTTTGGAATGAACAGCTTCCTCCAAATAAACAGCACCCTCCAAATAAACAGCAACGAGATGACGAACCAGCAGAGGTGTTGGAGATGATAGTTTCAACAAGATCCATGGAACTCATGAGTGGGAGCCTTCGAACAATAATCTACTTTGACTACGGGACATTGAAGAAGGCAACCAAGAATTTTCATTCTGTTAATCTTCTTGGAAGTGGTGGATTTGGGCCTGTCTATCGGGGAAAGTTGGCAAATGGAAGGCTAATTGCAGTTAAGAAACTGTCTCTTAACAAATCCCAGCAAGGAGAAAGAGAATTTCTGGCCGAGGTGAGAATGATCACCAGTATTCAACACAAAAATCTGGTTTGCCTTATTGGATGCTGCACAGAAGGGATTGAAAGGATACTTGTGTATGAATACATGAAGAACAAAAGTTTGGACCTCTACCTATATGGAAACAATGACCGATTTCTAGATTGGAGCACTAGGTTCCAAATTATTCTTGGAATAGCACGAGGATTGCAATATTTACATGAGGATTCACACATAAGAATTGTTCACCGAGATATTAAGGCAAGCAACATTCTTCTTGATGACAAGTTTCATCCAAGGATTGGAGACTTTGGGCTGGCTAGATTCTTCCCTGAAGACGAAGATTACCTCAGCACTCAGTTTGCTGGAACATTAGGCTATACAGCTCCTGAATATGCTATTAGAGGAGAATTGTCGGAAAAGGCAGACATCTATAGTTTTGGAGTCCTCGTTCTTGAAATAATAAGTTGCAGGAAAAATACTGACCTTACTTTACCATCTGAAAGGCAATATCTTCCTGAATATGCTTGGAAGCTGTTTGATAAGTCAAGGTTGATGGATCTTGTAGACCCAAAATTGCTGGAGCTTGGATTTATAGAGAGAGATGTTAAGCAAGCAATCCATGTGGCCTTCTTATGCATTCAATCTCATGCAAATTTAAGACCTCCCATGTCAGAGATTGTAGCATTATTGACATTCAAAATGGACATGGTTAAAACTCCAGTTAGACCGTCTTTCCTCGGCCAAAGGCATAGAAAGGATGATGAGAGCCATTCTTGGGAAACCATATCTCAGCTATACCCTTCACCAGTGCCTAGTGATTCTGCATCCATGGCTAAATCACTAAAGTAA 1395 0.4022 MTMTRIVDEPSEGFISYNRMPRRAIEVASPCSSQNIQASSLHTSEGLFFFFGGIVVLIILLILIFVFRNHIKPAKLMKMIVWNEQLPPNKQHPPNKQQRDDEPAEVLEMIVSTRSMELMSGSLRTIIYFDYGTLKKATKNFHSVNLLGSGGFGPVYRGKLANGRLIAVKKLSLNKSQQGEREFLAEVRMITSIQHKNLVCLIGCCTEGIERILVYEYMKNKSLDLYLYGNNDRFLDWSTRFQIILGIARGLQYLHEDSHIRIVHRDIKASNILLDDKFHPRIGDFGLARFFPEDEDYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSERQYLPEYAWKLFDKSRLMDLVDPKLLELGFIERDVKQAIHVAFLCIQSHANLRPPMSEIVALLTFKMDMVKTPVRPSFLGQRHRKDDESHSWETISQLYPSPVPSDSASMAKSLK 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0861 464 ProSiteProfiles Protein kinase domain profile. 141 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0861 464 MobiDBLite consensus disorder prediction 429 464 - -
Prci9g0861 464 Gene3D Transferase(Phosphotransferase) domain 1 218 427 - -
Prci9g0861 464 FunFam Cysteine-rich receptor-like protein kinase 10 108 217 - -
Prci9g0861 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Prci9g0861 464 MobiDBLite consensus disorder prediction 442 464 - -
Prci9g0861 464 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 218 422 - -
Prci9g0861 464 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 41 440 - -
Prci9g0861 464 SMART serkin_6 141 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0861 464 SUPERFAMILY Protein kinase-like (PK-like) 117 415 IPR011009 -
Prci9g0861 464 Pfam Protein tyrosine and serine/threonine kinase 144 410 IPR001245 GO:0004672|GO:0006468
Prci9g0861 464 Gene3D Phosphorylase Kinase; domain 1 104 217 - -
Prci9g0861 464 CDD STKc_IRAK 147 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0861 Prci-Chr9 23173263 23177770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0861 129 441 Receptor kinase-like Gene Family AT1G56120 49.840 2.01e-102 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci9g0861 PK_Tyr_Ser-Thr 4.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0861 - - qsa:O6P43_022399 582.793