Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0844 ATGGCTCCGAGAATCCTACTATGCGGCGACGTTATGGGCTGCCTCAACCAGCTCTTCAAGCGTGTTTCATCTGTCAATAAATCGGCTGGTCCCTTCGATGCGCTTTTCTGCGTGGGTCAATTCTTCCCGGAGTCTTCCGACCAGCTGGACGAGTTCATGGACTACATTGAGGGTCGAGCGCAGGTTCCTCTTCCGACTTACTTCATCGGCGACTATGGCTTCGGTGCGCCTAAAGTTTTATTAACAGCTTCTAAGGAGCCGGCAAACTGTGGCTTCAAAATGGATGGCTTGAAGGTTTGCGAGAATTTGTATTGGTTGAAAGGCAGTGGCAAGTTCTCCCTCTTGGGGTTATCTATTGCCTACTTATCCGGTAGACAATCATCAGATGTTCAACAGTATGGAGTTTACAGCCAAGATGATGTTGATGCTTTGAGAGCAGTAGCTGAGGAACCTGGAATAGTCGACTTGTTCTTGACTAATGAATGGCCTAGTGGGGTCACAAATAGAGCAAATGCTTCAGACGTTCCTGCTGGACTTTCAGATTCCATGGGGAGTGACTCAACCGTAGCAGAGTTGGTGGGAGAGATTAGACCACGCTATCACATTTCAGGTACTAAAGGTATTTACTATGCTCGTGAACCTTATTCTAATATTGAAGCCGTGCATGTGACTCGTTTCATAGGGCTTGCTTCTGTTGGAAATAAAGATAAGCAGAAATTTATTCATGCAATTTCTCCCACGCCTGCATCCACCATGTCCTCAACTGAGATTGCCACGAAAACCACCAATACCACCTTATCGCCATACACATTTGTGGAGAAAGGAAGTTCTCCCAAGGACACCACAAAGAGATCCAGTGATAGTGTCTCTGATTCTCAATATTGGAGATATGATGTTTCTCAAAAGCGACAGCGACATGGAGCTGGAGATGGTGATAAATTGTGTTTTAAATTCTTGTCCTCTGGTTCTTGTCCAAGGGGACAAAAGTGCAATTTTCGACATGATTTTGATGCTAGGGAGCAGTACATTAGAGGTGTTTGTTTTGATTTCTTAAACAAAGGGAAATGTGAAAGGGGTCCAGATTGCAGCTTTAAGCACAGCTTGCAACATGAAGGGGAGAATTATGCTGACAGGAGGCCAAGATCTGAAAATTCTAGTTCTAAAAGGTCAAAAGAGTGCTGGTTTTGCTTGTCAAGCCCCAATGTGGAGTTACATTTGATCACTAGCATTGGTGAAAATTACTATTGTGCATTGGCTAAAGGTCCAGTAGTTGAAGATCATGTACTACTAATACCAGTTGAGCATTTGCCAAATACATTGTCACCGTCAGCAGAACACGAAGTTGAGCTTAGTAAATTCCAGAACAGCCTAAGGATGTACTACAAGAGTCAAGGAAAGCAAGTCATCTTTTTTGAGTGGGTTTCCAAACGTAGTAGTCATGCCAATCTTCAGGTTGTTCCTATTCCAAGTTCCAAAGCAGCACTGGTTGAAAAAATATTCAGTTTAGCAGCAGAAAAGTTAGGATTTAAATTTGTGGCTAAGAAATTTGATAGCGATTCTGATGGAAGAAAATTTTTGAGGGCACAATTTGATGGAAATTCAAGTTTGTTCTATGTTGAACTACCAGGAAGCACGATATTGTTGCATCAGATTGAAGATAATGAGAAATTTCCTTCCCAATTTGGTCGTGAGGTTGTATCAGGCTTGCTTAATATAGCGGATAAGGCAGATTGGAGGAATTGCAAATACAGCAAGGTGGAAGAAACAAAAATGGTTGAAGATTTTAAGAGTCGATTTCAAGAATTTGATCCAAACTGTTGA 1821 0.4234 MAPRILLCGDVMGCLNQLFKRVSSVNKSAGPFDALFCVGQFFPESSDQLDEFMDYIEGRAQVPLPTYFIGDYGFGAPKVLLTASKEPANCGFKMDGLKVCENLYWLKGSGKFSLLGLSIAYLSGRQSSDVQQYGVYSQDDVDALRAVAEEPGIVDLFLTNEWPSGVTNRANASDVPAGLSDSMGSDSTVAELVGEIRPRYHISGTKGIYYAREPYSNIEAVHVTRFIGLASVGNKDKQKFIHAISPTPASTMSSTEIATKTTNTTLSPYTFVEKGSSPKDTTKRSSDSVSDSQYWRYDVSQKRQRHGAGDGDKLCFKFLSSGSCPRGQKCNFRHDFDAREQYIRGVCFDFLNKGKCERGPDCSFKHSLQHEGENYADRRPRSENSSSKRSKECWFCLSSPNVELHLITSIGENYYCALAKGPVVEDHVLLIPVEHLPNTLSPSAEHEVELSKFQNSLRMYYKSQGKQVIFFEWVSKRSSHANLQVVPIPSSKAALVEKIFSLAAEKLGFKFVAKKFDSDSDGRKFLRAQFDGNSSLFYVELPGSTILLHQIEDNEKFPSQFGREVVSGLLNIADKADWRNCKYSKVEETKMVEDFKSRFQEFDPNC 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0844 606 MobiDBLite consensus disorder prediction 268 288 - -
Prci9g0844 606 ProSiteProfiles Zinc finger C3H1-type profile. 309 337 IPR000571 GO:0046872
Prci9g0844 606 Gene3D - 387 508 IPR036265 -
Prci9g0844 606 FunFam Zinc finger CCCH domain-containing protein 59 370 495 - -
Prci9g0844 606 Pfam Protein similar to CwfJ C-terminus 1 384 500 IPR006768 -
Prci9g0844 606 SUPERFAMILY CCCH zinc finger 313 338 IPR036855 GO:0046872
Prci9g0844 606 CDD MPP_CWF19_N 6 232 - -
Prci9g0844 606 Gene3D - 298 371 - -
Prci9g0844 606 SUPERFAMILY HIT-like 391 468 IPR036265 -
Prci9g0844 606 Pfam Protein similar to CwfJ C-terminus 2 524 603 IPR006767 -
Prci9g0844 606 SMART c3hfinal6 311 336 IPR000571 GO:0046872
Prci9g0844 606 SMART c3hfinal6 343 368 IPR000571 GO:0046872
Prci9g0844 606 Coils Coil 606 606 - -
Prci9g0844 606 ProSiteProfiles Zinc finger C3H1-type profile. 341 369 IPR000571 GO:0046872
Prci9g0844 606 PANTHER CWF19, CELL CYCLE CONTROL PROTEIN 4 605 IPR040194 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Prci9g0844 CwfJ_C_1 4.1e-38 CL0265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0844 K24939 - gmx:100782106 970.304