Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0832 ATGAACGAAGTTATGGGAGGAGTAGCTCGAGTCAAATCAGAGCCAGTAACGGTGTCCGATGAGGACACTAGTCATTCGAACTCTGATGGGTACTGTGATGTTGAAGGTGAACTACTCGACGGCGTTTTCAGTGACGATTCGGGAAGGAAGAGCTCGCAAGTGACGGGTGAGGGGTTTATTGAACCGGTTCACGTCAAGTTAGAGGAACCGGGTGAAGAGGTGGATGATGTCGATGGCGGTGTTGGAGTTAATGGATCGTCGTACTCGTCGCCGATCGACTTGCCGAAACCGATGGAAGGGTTGCACGAGCTTGGCCCGCCGCCGTTCCTCAAGAAGACTTTCGAGATGGTGGAGGACCCGATGACTGACCCGATTGTATCCTGGAGTAAAGCTCGTGATAGCTTCATCGTTTGGGATTCCCACGAATTTTCCAAAATTCTTCTCCCTAAGTACTTCAAACATAGCAATTTCTCGAGCTTTATTCGCCAGCTTAATACATACGGATTTCGGAAGATTGATTCAGATCGTTGGGAGTTTGCGAACGAAGGATTTCAGGGTGGAAAGAAGCATTTGCTAAAGAACATCAGGAGAAGAAGCAAGTATAACAAACTGCAGCAAGGAGGAGCATTGACTTCCATGAAACCTGGCCTGGAGGCTGAAGTTGAGAGACTGAGGAAGGATCAGAACATACTGAAAGTTGAAATTCTGAAGCTGAGACAGCAACAAGAGACTTCACGGGTTCAGCTTGTGGACGTTCAAGAACGAGTTCGGTCTGCTGAGTTGAAGCAGTGCCAGATGATTTATTTCCTGACCAAAATGGCCAGAAGACCAACATTGGTTCAGCAGTTAATCGAGAAGGTAAAGCGTAAAAGAGAGCTCAGTGGGGGTGAGATCGGTAAGAGACCCAGATTGCTTGGAACCCATTGCCCTGTCGGCCTCCCTAAGACCATGGACACCATTCCTGATGTTGATTATAGACAAGGTTATAAGGACTTGGCTTCATTGCAATCAGAGCTCAATGGACTCTTGTCTGAAACAGTAAACAATAGCAGAACGCAGCCTGCAGCCCCTTTTCCTCTGAAAGATGAACTATGCAGTTCTATACAGGGATTAAGTACCGATAATTCAAGGGCAAGCGCTACCCAAGCATCGTCTGCAGCCTGCTGTATGGTGTCCGAAAAACTGATGGAAGAGAACTTTGTTGTTGATGAAGGGCTTGATGTGAATGATTCAAATATCTATCTTGAATTGGTGGATTTGATCAGCAAACCAGCTGATTGGGCTGGATCCGCAGGTGGATTGGTGGGGCAAACTGGTTGTATGTGA 1326 0.4721 MNEVMGGVARVKSEPVTVSDEDTSHSNSDGYCDVEGELLDGVFSDDSGRKSSQVTGEGFIEPVHVKLEEPGEEVDDVDGGVGVNGSSYSSPIDLPKPMEGLHELGPPPFLKKTFEMVEDPMTDPIVSWSKARDSFIVWDSHEFSKILLPKYFKHSNFSSFIRQLNTYGFRKIDSDRWEFANEGFQGGKKHLLKNIRRRSKYNKLQQGGALTSMKPGLEAEVERLRKDQNILKVEILKLRQQQETSRVQLVDVQERVRSAELKQCQMIYFLTKMARRPTLVQQLIEKVKRKRELSGGEIGKRPRLLGTHCPVGLPKTMDTIPDVDYRQGYKDLASLQSELNGLLSETVNNSRTQPAAPFPLKDELCSSIQGLSTDNSRASATQASSAACCMVSEKLMEENFVVDEGLDVNDSNIYLELVDLISKPADWAGSAGGLVGQTGCM 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0832 441 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 95 330 IPR027725 -
Prci9g0832 441 PRINTS Heat shock factor (HSF) domain signature 109 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci9g0832 441 PRINTS Heat shock factor (HSF) domain signature 147 159 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci9g0832 441 PRINTS Heat shock factor (HSF) domain signature 160 172 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci9g0832 441 SMART hsfneu3 105 198 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci9g0832 441 MobiDBLite consensus disorder prediction 1 32 - -
Prci9g0832 441 ProSitePatterns HSF-type DNA-binding domain signature. 148 172 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci9g0832 441 SUPERFAMILY "Winged helix" DNA-binding domain 105 198 IPR036390 -
Prci9g0832 441 FunFam Heat shock transcription factor 1 102 199 - -
Prci9g0832 441 Pfam HSF-type DNA-binding 109 198 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci9g0832 441 Coils Coil 221 241 - -
Prci9g0832 441 Gene3D - 102 199 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0832 Prci-Chr9 22963004 22965656 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0832 95 307 HSF AT2G26150 56.164 1.18e-84 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Prci9g0832 HSF_DNA-bind 6.5e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0832 K09419 - gmx:100818430 513.457