Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0831 ATGGAATTGGTGAAACCACTTTGCGCTGCAATGGTTTCTCCTCCTATTATTGAAGAAGGTGAGTTTGAGAAGGAAGAACTTGGTCAAAAGATTCATGTAGGAACACACCTTTCTCTAGATGATGGTATGGAAAATAGTGAACCGTTGAATTTGAGTATTGAACTTGAGAGAATACAAAAGGAAATGGAATTGGTGAGACCTGTTTCTGCTACAGTTGTTTCTCTTCCTGCTACTGAGGAGGGTAACTTTGAGAAGAAAGAACAACATGGTCAAAATGTACCCGAGGCTATGCAATTTTTGGTTGATCAGGGTACGAATAATAAAGAATCAAATTCAAGTATAGAGGATGAGAAACAAAAAAGGGAAATAGACTCAGCAATACCAGTTTGTGCTGCAACGATTTCTCTTCCTACTTCTGAAGAGGGTGAGTTTGAGAAGGAAGAACAACACAGTCAAAAGGCTTCTGAAGCAATGCATGTTTCGGTAGATCAGGCTATGAATAGTGAAGCATTGATTTCAAGTATAAAGCTCAATAGACAACAAAAGGAAATGGCAGTGTTGAAACCTGTTTCGGCTGCAATTATTTCTCTTCCTAATACTGAAGAGGGGGAGTTTAAGAAGGATGAACAACAGGGTCAAAAGGTTCATGAATCAATGCAATTTCCCGTAGATCAGGATATGAATAATGACACATCAAATTCACATATAAAGCATAATAAACAACAAAAGGAATTAGGCTCAGTGAAACCAGTTGGTGCTGCAATGGTTTCTCTCCCTACTACCAACGAGGTTGATTTTGAGAAGGAAGAACATGGTCAAAAGGTTCCTGAGGTAATGCAATTTTCTTTTGTGGGTATGAATAATAAAGCATCAAATGCAAATCTAAAGCATGAGAAACAACAAGAGGAAATGGACTCGGCGAAGCCAGTCTGTGCTGTAACTGTTTCTCTTCATACTACCAAAGAAGGTGAGTTTGAGAAGGAAGAACAACATGGTCAAAAGGCTCCTGAAGCAATGCAACTTCCTGTAGATCAGGGTATGGATAGCGAACTATTGATTTTAAAAAGAAAGCCTAAAAGACAACAAAATGAAATGGAATTGGGGAGACCTGCCTGTGCTGCAGTTGTTTCTCTTCTTGATATTGAAAAGGATGAACTTGAGGAGGAAGAACATAATAGTAGTGATGCGTCCAAGCTCACTAAGACATATGTAAGGAAGAGTAAGAAGAGGGGTTTGGGCCAGTTGGGCTTGGACCCATCAGGTAGAAAGGTCCCTGAAGCAATTCACTTGTCTGCAAATCAGGGTATGAATGGTGAAACATTGAACTTGGGCGGAGACAGTGAAGAGATGTCATCAATGGACATTGATATTTTGGATGCTAAACATATAATGCAGCATGAAGAAAAGCAGCCAGACAAAATAACTTGTGCAAATGATGCAACATTTTCCGATCATCCAGATAAGGAAGAAGACATTGAAGAGGGAGAAATTTCAGGTGACTTTAGAATGGATGAGAATTCAATTGATGTATCTTCTGTAGATTCTTTGTTGATAGAACAGAGAAAACATTATGTACAAAAGCCCAAACATATTGAAAATATAGTATTTCCTTTTAATAAACAGAAAGAAGAAAAAGAAAAAGAATACAAATCAACTCAAGATGCTTGTAACAGTGGACTTATGGAACCTAGGAAAAGTGATAAAAATTATTTTCCAAATGGAGTTGATCTTGGAATGTCTCGGGAAATTATTGATTATAGAGATTTAGTGGAGCATGGTTCTGTGGTGATTGGAAAAAGTGAAGACCGTGGAATTAAAGGGGTTGTTGGCTTGCCACCAACTTTTTCTAACAAAAAAGTCTTGCCTAAAGTTGTTTTGGAAGAAGCCACTGAAGATCATCAAGACACATCTGCAGTAAAGAAAGCCGGCATCAGTTGTAAGAAAAAACGTGGTCCTGTTACTGAGGAAAGGAAGGCTAAAAAGAAGGAAAAGAAAAGAAAGAAGAGGGCAGAAAAGAACAGAAAACTTGGTGTTAAAAGGTTGAAGTTGCAGCCAGTACAGAAACCAAAAACTATCACATATTGCCGCCATTATATGCAGGGAAGGTGCCACGAGGGTGACAAGTGCAAGTTCTCACATGACATAGTGCCCCTGACGAAATCAACGCCATGCTGTCATTTTGCTCGTCACTCTTGCATGAAAGGTGATCATTGTCCATTTGATCATGACCTCTCCAAGTATCCTTGTAGCAATGTTGTGACAAGAGGTTCTTGCAGCAGAGGAAATGCTTGTATGTTTTCACACCAGATACCAACTAAGCAAGATGTTGTTACATCTTCAAATGATGGCAAGCCTGAGTTGAAGCCTAAACTAGGAGGAAATACAAAATTGAGCAAGTCACCGAACATCAGCAGCAGCAGTGGTTCCCAGTTCAAACAGATCTCTGATTCAAAAGGCATTCAATGTCACATCAATTCAGAAAAAGAGGTGGCAGACACTGTAAAGAAACTACGGACAGTGCCCCCTAAAGGGATTAGTTTCATCAATGTTTCAAAATCATCGTCTCCAAAACAAGGGATGGTAACACCAAACAAGGAAAGTTCTGTTCAAATTGGGAACCTTACTGGCCAAAGTGCATCTGGTGCAGCTTTAAACTCGGAGAATCCTGAGAAAACGCCAGTGGTGGCACCTAAGGGAATTAACTTCCTTTCATTTGGAAAAGGTCGTGTTTCCAGTTTCAAAAGTACTGTTTGCTCCTTTTTGGATAAGGAAAATGGTATCAGGTTGTCTCACAAAGAAAATTTAGGTACGCCTGATCATGCATCTCTGGAGAAGGATGATTGCGGTAAAGTTGGCAGTGGGACAAAGCAAAGTATGCTGCAGACTGCTCTGCGCTCAAATGAGATTTTAAAGCAAAATCAATGTATAGCTGAGGGAATGAATTTGGATTTTCGAGGAAAAGCTTCTATAGATCATTATGGCAGTGATGTGCAATTTAGCTCAACCTCTCATCAGGATCACAGTCTTAGTAGATCAGTGCAAAAGGGAGCAAAGGCATATACTCCTCAGACCTCAACCGTTACCTCATCCATGCTTCCAACTTCTCCATTGCTTTCAGGCCAATCATCAGAACGCCTAGCATCTGGGCATCATAAGCACGTACTTAACTCGGCCCAAAGGGCACTGTTATCAACTCTATCATTTGCAGCAGAGCACGAGTCCAATATTAAGCTAAAATTCCCTGTTGGTGCATCAGCTGTGAAATTAGAGATGAACAAGGATGTACAGCAGTTCATACATCCAAAAATGTCAGGTAGTTTATGA 3324 0.3989 MELVKPLCAAMVSPPIIEEGEFEKEELGQKIHVGTHLSLDDGMENSEPLNLSIELERIQKEMELVRPVSATVVSLPATEEGNFEKKEQHGQNVPEAMQFLVDQGTNNKESNSSIEDEKQKREIDSAIPVCAATISLPTSEEGEFEKEEQHSQKASEAMHVSVDQAMNSEALISSIKLNRQQKEMAVLKPVSAAIISLPNTEEGEFKKDEQQGQKVHESMQFPVDQDMNNDTSNSHIKHNKQQKELGSVKPVGAAMVSLPTTNEVDFEKEEHGQKVPEVMQFSFVGMNNKASNANLKHEKQQEEMDSAKPVCAVTVSLHTTKEGEFEKEEQHGQKAPEAMQLPVDQGMDSELLILKRKPKRQQNEMELGRPACAAVVSLLDIEKDELEEEEHNSSDASKLTKTYVRKSKKRGLGQLGLDPSGRKVPEAIHLSANQGMNGETLNLGGDSEEMSSMDIDILDAKHIMQHEEKQPDKITCANDATFSDHPDKEEDIEEGEISGDFRMDENSIDVSSVDSLLIEQRKHYVQKPKHIENIVFPFNKQKEEKEKEYKSTQDACNSGLMEPRKSDKNYFPNGVDLGMSREIIDYRDLVEHGSVVIGKSEDRGIKGVVGLPPTFSNKKVLPKVVLEEATEDHQDTSAVKKAGISCKKKRGPVTEERKAKKKEKKRKKRAEKNRKLGVKRLKLQPVQKPKTITYCRHYMQGRCHEGDKCKFSHDIVPLTKSTPCCHFARHSCMKGDHCPFDHDLSKYPCSNVVTRGSCSRGNACMFSHQIPTKQDVVTSSNDGKPELKPKLGGNTKLSKSPNISSSSGSQFKQISDSKGIQCHINSEKEVADTVKKLRTVPPKGISFINVSKSSSPKQGMVTPNKESSVQIGNLTGQSASGAALNSENPEKTPVVAPKGINFLSFGKGRVSSFKSTVCSFLDKENGIRLSHKENLGTPDHASLEKDDCGKVGSGTKQSMLQTALRSNEILKQNQCIAEGMNLDFRGKASIDHYGSDVQFSSTSHQDHSLSRSVQKGAKAYTPQTSTVTSSMLPTSPLLSGQSSERLASGHHKHVLNSAQRALLSTLSFAAEHESNIKLKFPVGASAVKLEMNKDVQQFIHPKMSGSL 1107
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0831 1107 MobiDBLite consensus disorder prediction 775 812 - -
Prci9g0831 1107 ProSiteProfiles Zinc finger C3H1-type profile. 718 745 IPR000571 GO:0046872
Prci9g0831 1107 ProSiteProfiles Zinc finger C3H1-type profile. 748 771 IPR000571 GO:0046872
Prci9g0831 1107 SMART c3hfinal6 690 715 IPR000571 GO:0046872
Prci9g0831 1107 SMART c3hfinal6 718 744 IPR000571 GO:0046872
Prci9g0831 1107 SMART c3hfinal6 746 770 IPR000571 GO:0046872
Prci9g0831 1107 SUPERFAMILY CCCH zinc finger 689 714 IPR036855 GO:0046872
Prci9g0831 1107 Gene3D - 647 719 - -
Prci9g0831 1107 Pfam CCCH-type zinc finger 695 714 IPR041367 -
Prci9g0831 1107 Coils Coil 653 673 - -
Prci9g0831 1107 MobiDBLite consensus disorder prediction 795 812 - -
Prci9g0831 1107 MobiDBLite consensus disorder prediction 660 675 - -
Prci9g0831 1107 MobiDBLite consensus disorder prediction 637 675 - -
Prci9g0831 1107 FunFam C3H-type transcription factor 647 718 - -
Prci9g0831 1107 Gene3D - 720 783 - -
Prci9g0831 1107 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 122 1093 IPR045124 GO:0003723|GO:0045892
Prci9g0831 1107 ProSiteProfiles Zinc finger C3H1-type profile. 689 716 IPR000571 GO:0046872
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci9g0831 Prci-Chr9 22955205 22979707 Proximal
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Prci9g0831 zf-CCCH_4 3.3e-07 CL0537
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0831 - - pcin:129320444 2099.71