Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0830 ATGGGAGGAGTAGCTCGAGTCAAATCAGAGCCAGTAACGGTGTCCGATGAGGACACTAGTCATTCGAACTCTGATGGGTACTGTGATGTTGAAGGTGAACTACTCGACGGCGTTTTCAGTGAGGATTCGGGAAGGAAGAGCTCGCAAGTGACGGGTGAGGGGTTTATTGAACCGGTTCACGTCAAGTTAGAGGAACCGGGTGAAGAGGTGGATGATGTCGATGGCGGTGTTGGAGTTAATGGATCGTCGTACTCGTCGCCGATCGACTTGCCGAAACCGATGGAAGGGTTGCACGAGCTTGGCCCGCCGCCGTTCCTCAAGAAGACTTTCGAGATGGTGGAGGACCCGATGACTGACCCGATTGTATCCTGGAGTAAAGCTCGTGATAGCTTCATCGTTTGGGATTCCCACGAATTTTCCAAAATTCTTCTCCCTAAGTACTTCAAACATAGCAATTTCTCGAGCTTTATTCGCCAGCTTAATACATACGGATTTCGGAAGATTGATTCAGATCGTTGGGAGTTTGCGAACGAAGGATTTCAGGGTGGAAAGAAGCATTTGCTAAAGAACATCAGGAGAAGAAGCAAGTATAACAAACTGCAGCAAGGAGGAGCATTGACTTCCATGAAACCTGGCCTGGAGGCTGAAGTTGAGAGACTGAGGAAGGATCAGAACATACTGAAAGTTGAAATTCTGAAGCTGAGACAGCAACAAGAGACTTCACGGGTTCAGCTTGTGGACGTTCAAGAACGAGTTCGGTCTGCTGAGTTGAAGCAGTGCCAGATGATTTATTTCCTGACCAAAATGGCCAGAAGACCAACATTGGTTCAGCAGTTAATCGAGAAGGTAAAGCGTAAAAGAGAGCTCAGTGGGGGTGAGATCGGTAAGAGACCCAGATTGCTTGGAACCCATTGCCCTGTCGGCCTCCCTAAGACCATGGACACCATTCCTGATGTTGATTATAGACAAGGTTATAAGGACTTGGCTTCATTGCAATCAGAGCTCAATGGACTCTTGTCTGAAACAGTAAACAATAGCAGAACGCAGCCTGCAGCCCCTTTTCCTCTGAAAGATGAACTATGCAGTTCTATACAGGGATTAAGTACCGATAATTCAAGGGCAAGCGCTACCCAAGCATCGTCTGCAGCCTGCTGTATGGTGTCCGAAAAACTGATGGAAGAGAACTTTGTTGTTGATGAAGGGCTTGATGTGAATGATTCAAATATCTATCTTGAATTGGTGGATTTGATCAGCAAACCAGCTGATTGGGCTGGATCCGCAGGTGGATTGGTGGGGCAAACTGGTTGTATGTGA 1314 0.4734 MGGVARVKSEPVTVSDEDTSHSNSDGYCDVEGELLDGVFSEDSGRKSSQVTGEGFIEPVHVKLEEPGEEVDDVDGGVGVNGSSYSSPIDLPKPMEGLHELGPPPFLKKTFEMVEDPMTDPIVSWSKARDSFIVWDSHEFSKILLPKYFKHSNFSSFIRQLNTYGFRKIDSDRWEFANEGFQGGKKHLLKNIRRRSKYNKLQQGGALTSMKPGLEAEVERLRKDQNILKVEILKLRQQQETSRVQLVDVQERVRSAELKQCQMIYFLTKMARRPTLVQQLIEKVKRKRELSGGEIGKRPRLLGTHCPVGLPKTMDTIPDVDYRQGYKDLASLQSELNGLLSETVNNSRTQPAAPFPLKDELCSSIQGLSTDNSRASATQASSAACCMVSEKLMEENFVVDEGLDVNDSNIYLELVDLISKPADWAGSAGGLVGQTGCM 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0830 437 SMART hsfneu3 101 194 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci9g0830 437 Pfam HSF-type DNA-binding 105 194 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci9g0830 437 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 91 326 IPR027725 -
Prci9g0830 437 PRINTS Heat shock factor (HSF) domain signature 143 155 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci9g0830 437 PRINTS Heat shock factor (HSF) domain signature 105 128 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci9g0830 437 PRINTS Heat shock factor (HSF) domain signature 156 168 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci9g0830 437 FunFam Heat shock transcription factor 1 98 195 - -
Prci9g0830 437 MobiDBLite consensus disorder prediction 1 29 - -
Prci9g0830 437 SUPERFAMILY "Winged helix" DNA-binding domain 101 194 IPR036390 -
Prci9g0830 437 ProSitePatterns HSF-type DNA-binding domain signature. 144 168 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci9g0830 437 Coils Coil 217 237 - -
Prci9g0830 437 Gene3D - 98 195 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0830 Prci-Chr9 22944999 22947552 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0830 91 361 HSF AT2G26150 48.014 9.11e-85 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Prci9g0830 HSF_DNA-bind 6.4e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0830 K09419 - gmx:100818430 514.612