Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0829 ATGGAGTTTAGAATCACGATTTCCGATTCCAACGAGATCAGCAATAATGGAAGCGGAGTTTGCTATTTAGCCAGCAGCTCCCAAACCCATTTCACCCCAGAAGCTTCACTTCCTCCAGACGTCGCAGCCCTGAAGCGGCTCTCCGACAACCTCGAGTCAATCTTCGAAGCCTCGGAATCCGACGACTTCTTTGCGGACGCCAGAATCGTTCTTGGCGACGGTCGGGAAGTTCCGGTTCACCGCTGCATTCTGGCCGCGAGGAGCCCTTTCTTCAAGAACGTGTTGTCGGGGAAGGAGCGGGATGGGGTGAAGTTGGAATTGAAGGAATTGGCTAAGGATTATGAGATTGGGTTCGACGTGATTGTGGTTGTTGTGAGTTATTTGTATAGTGGCAAAGTAAGGTCGTGGCCCAAAGGTATTTGTGTGTGTGTGGACGATGATTGCTCCCATCTTGGGTGTCGACCTGCTGTGGAATTCATGGCTAAATTGCTCTATGCTTCGTCTGCGTTTGAAATATCTGAGTTGGTTGATCTTTATCAGAGGCATCTGCTACAAATTCTTGACAAGATAGCAGCAGATGAAATTCTGTTGGTTCTTTCTGTTGCAAATATATGCGGTAAATCCTGTGAGACACTATTAGGAAGGTGTACTGAGCTGATTGTTAAGTCTGATATTGATGTCATTACCCTTGAAAAAGCTCTGCCACAGCATATTGTGAAACAAATTATTGATAAACGTATAGAACTAGGCTCAGACAAGCCCAAGAACATCTGTTTGCCAGATAAATATGTGAAGAGAATACATAGGGCTCTTGATTCTGATGATGTTGAGTTAGTCAGGTTGCTCTTGAGAGAGGGACATACCAATCTAGATGATGCCTATGCCCTTCACTATGCTGTTGCATACTGTGATACCAAGATCACAACCGAGCTTCTTGATCTTGGACTTGCTGATGTTAATGGTAAAAATCCTAGGGGATGTAGTGTGCTTCATGTGGCTGCAATGAGGAAGGAGCCTAAGCTTATAGTGTCACTTTTGACAAAGGGAGCCCAGCCTTCTGATCTCACTTTGGATGGTAAGAAAGCCCTTCAAATTTCAAAGCGTCTCACTAAGGCCGTGGATTATTACAGTGCTGAGGAAGGAAAGGCATCTTCCAGGGACAGATTATGCATAGAGATATTAGAACAAGCTGAGAGAAGAGAGCCTTTACTTGGGGAGGCGTCTTTTTCACTTGCTATGGCAGGGGATGATTTGCGTATGAAACTGTTGTACCTTGAAAACAGAGTCGGACTGGCGAAGCTATTGTTTCCCATGGAAGCCAAAGTTGTGTTGGACATCGTTCAAATTGATGGAACCTGTCCATTTTCAGATATATCTCAAAATGGAAGTACTAATACTCAGAGGAACGCTGTGGATTTGAACGAGGCACCTTTCAAAATAAAGGAGGAGCATCTGGCCAGGATGAGAGTACTCTCTAGATCTGTTGAGTTAGGGAAGCGATTCTTTCCTCGGTGTTCGGAAGTTCTGAACAAGATCATGGATACTAATAACCTGTCACAGATTGCATACATGGGTAACGACACTCCAGAAGAAAGACAAGCCAAGAGAAGAAGATATATGCAGCTGCAAGAAGTTCTGAGTAAGGCTTTCAATGAGGACAAGCAAGAGTTTGATAAATCTGCAGTCTCATCATCATCTTCTTCAGCATCAATAGGAATGGTTGGGAGGAACCCCATGAATGAACTTGACTCAACATTAGATGTGTGTTTGAATCGAGAAAAATGA 1785 0.4426 MEFRITISDSNEISNNGSGVCYLASSSQTHFTPEASLPPDVAALKRLSDNLESIFEASESDDFFADARIVLGDGREVPVHRCILAARSPFFKNVLSGKERDGVKLELKELAKDYEIGFDVIVVVVSYLYSGKVRSWPKGICVCVDDDCSHLGCRPAVEFMAKLLYASSAFEISELVDLYQRHLLQILDKIAADEILLVLSVANICGKSCETLLGRCTELIVKSDIDVITLEKALPQHIVKQIIDKRIELGSDKPKNICLPDKYVKRIHRALDSDDVELVRLLLREGHTNLDDAYALHYAVAYCDTKITTELLDLGLADVNGKNPRGCSVLHVAAMRKEPKLIVSLLTKGAQPSDLTLDGKKALQISKRLTKAVDYYSAEEGKASSRDRLCIEILEQAERREPLLGEASFSLAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVVLDIVQIDGTCPFSDISQNGSTNTQRNAVDLNEAPFKIKEEHLARMRVLSRSVELGKRFFPRCSEVLNKIMDTNNLSQIAYMGNDTPEERQAKRRRYMQLQEVLSKAFNEDKQEFDKSAVSSSSSSASIGMVGRNPMNELDSTLDVCLNREK 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0829 594 Gene3D Potassium Channel Kv1.1; Chain A 41 222 IPR011333 -
Prci9g0829 594 SMART BTB_4 65 187 IPR000210 GO:0005515
Prci9g0829 594 MobiDBLite consensus disorder prediction 560 574 - -
Prci9g0829 594 FunFam Non-expressor of PR1 38 222 - -
Prci9g0829 594 SMART ANK_2a 262 290 IPR002110 GO:0005515
Prci9g0829 594 SMART ANK_2a 291 321 IPR002110 GO:0005515
Prci9g0829 594 SMART ANK_2a 325 354 IPR002110 GO:0005515
Prci9g0829 594 SUPERFAMILY POZ domain 47 186 IPR011333 -
Prci9g0829 594 SUPERFAMILY Ankyrin repeat 265 367 IPR036770 -
Prci9g0829 594 Pfam NPR1/NIM1 like defence protein C terminal 367 568 IPR021094 -
Prci9g0829 594 Gene3D - 237 486 IPR036770 -
Prci9g0829 594 PANTHER REGULATORY PROTEIN NPR3 5 570 IPR044292 GO:0009862|GO:2000022|GO:2000031
Prci9g0829 594 Pfam Domain of unknown function (DUF3420) 224 268 IPR024228 -
Prci9g0829 594 MobiDBLite consensus disorder prediction 556 576 - -
Prci9g0829 594 FunFam BTB/POZ domain and ankyrin repeat-containing protein NPR1 236 388 - -
Prci9g0829 594 CDD BTB_POZ_NPR_plant 45 187 - -
Prci9g0829 594 ProSiteProfiles BTB domain profile. 65 133 IPR000210 GO:0005515
Prci9g0829 594 Pfam BTB/POZ domain 58 185 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0829 Prci-Chr9 22936626 22940599 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Prci9g0829 NPR1_like_C 4.3e-85 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0829 K14508 - tcc:18588372 794.653