Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0811 ATGGTTCTTGAGTACCACAAATCTGTGCTCGAGGAAGAAGATGGGTTCAGCAACGATTCTGCCACAACCCATCCTCCTCCTCCTCTGAGTGGGACTGGAAGTGTGTTGGTTTATAAGGCCATAAGCTATCATCCTGAGGAAGCACTGTCTCTGATCAACTTCAAAGCCAATAATGGTGGGTATAACACTGTCGTGAATGGTGGTGAATCTTTGCTTAGCTTTCAGCAGAAAGAGTACTATGTGTGGGAGAATAATAATGGTTTGCACCAGTGGAATCAGATTAGTAGCCCCAGGGCCACCACTTCAGACCAAAGAATGATTCAGGATTTTAATTGCATTCAAACTAATAACAATGGTGCAAAAGAGAAGCAGCAGCAAGGTGAGAGTTCATATGGGTGGCTCTACTCTGAACCAAATGTTCCTTCTGATAACAGCCTTCAGGATTCTTCGGGAGCAAAAGCAGCATCTTTCCATAAGCGCCTTTCAATGGGAGAGAGCATGCAGGCCTCGAAGAAGCAATGCACTGCTAGTAATGCTGCAAATAAACCAATAAACCAAAAGTCAAACTCATCTAAGGATCCTCATAGTATTGCAGCCGAGAATAGAAGAGAGAGGATAAGCGAGAGACTCAAGATGCTACAAGAACTAGTTCGTAATGGCTCCAAGGTTGATTTGGCGACTATGTTGGAGAAAGCCATTAGTTATGTGAAGTTTCTTCAACTGCAAGTGAAGGAACTGGCAACCGATGAATTTTGGCCAGTCCAAGGAGGAAAAGCACCTGATATTTCTCAAGTAAAAGAAGCCATTGATGCCATTCTTTTACCCCAGAGAGACAGAAACTCAACCTCAATGCATCAGAATTGA 864 0.4352 MVLEYHKSVLEEEDGFSNDSATTHPPPPLSGTGSVLVYKAISYHPEEALSLINFKANNGGYNTVVNGGESLLSFQQKEYYVWENNNGLHQWNQISSPRATTSDQRMIQDFNCIQTNNNGAKEKQQQGESSYGWLYSEPNVPSDNSLQDSSGAKAASFHKRLSMGESMQASKKQCTASNAANKPINQKSNSSKDPHSIAAENRRERISERLKMLQELVRNGSKVDLATMLEKAISYVKFLQLQVKELATDEFWPVQGGKAPDISQVKEAIDAILLPQRDRNSTSMHQN 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0811 287 MobiDBLite consensus disorder prediction 117 198 - -
Prci9g0811 287 Pfam Helix-loop-helix DNA-binding domain 195 240 IPR011598 GO:0046983
Prci9g0811 287 Coils Coil 196 216 - -
Prci9g0811 287 Gene3D - 184 250 IPR036638 GO:0046983
Prci9g0811 287 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 187 249 IPR036638 GO:0046983
Prci9g0811 287 SMART finulus 196 245 IPR011598 GO:0046983
Prci9g0811 287 FunFam Transcription factor bHLH83 188 247 - -
Prci9g0811 287 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 84 273 - -
Prci9g0811 287 MobiDBLite consensus disorder prediction 117 152 - -
Prci9g0811 287 CDD bHLH_AtIND_like 191 253 - -
Prci9g0811 287 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 190 239 IPR011598 GO:0046983
Prci9g0811 287 MobiDBLite consensus disorder prediction 166 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0811 Prci-Chr9 22816765 22818120 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0811 133 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G66470 65.333 1.45e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci9g0811 HLH 1.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0811 - - gmx:100810010 300.441