Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0808 ATGGCTGACCTGGATGCAAGAAGAGCCGTGGTGCTTGGAAATGCAGAAAGAACTATCCAAAGACAAATACGCACCTATATTGCACGCAAGGAGTTCATTGAATTGCGGCAAGCTGCAATTTACTTGCAATCTAACTTGCAAGGCATATTGGCTTGGAAGCTGTATGAGCAGTTGCGGAGTGAAGCAGCAGCTGTGAAGATAGGGAAGAATTTCAGAGGATACATTGCAAGGAAATGTTCCCTAACAGCACGATCATCTGCAATCACACTACAGACAGGTTTAAGGGCAATGAAGGCTCGTGATGAATTTAGATTTAGAAAGCAAACAAAGGCTGCAATTATTGTACAGGCTCGCGTGCGTCAACATATTGCACATTCTTATTATAGAAGACTGCAGAAAGCTGCAGTTGTTATTCAATGTGGCTGGAGGAAAAGGGTTGCTAGGAGGGAACTCAGAAAACTTAAAATGGCTGCAAGAGAAACAGGGGCTCTTCAAGAGCGAAGAACAAACTAG 513 0.4366 MADLDARRAVVLGNAERTIQRQIRTYIARKEFIELRQAAIYLQSNLQGILAWKLYEQLRSEAAAVKIGKNFRGYIARKCSLTARSSAITLQTGLRAMKARDEFRFRKQTKAAIIVQARVRQHIAHSYYRRLQKAAVVIQCGWRKRVARRELRKLKMAARETGALQERRTN 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0808 170 ProSiteProfiles IQ motif profile. 83 112 IPR000048 GO:0005515
Prci9g0808 170 Pfam IQ calmodulin-binding motif 62 78 IPR000048 GO:0005515
Prci9g0808 170 Pfam IQ calmodulin-binding motif 18 32 IPR000048 GO:0005515
Prci9g0808 170 Pfam IQ calmodulin-binding motif 133 152 IPR000048 GO:0005515
Prci9g0808 170 Pfam IQ calmodulin-binding motif 84 104 IPR000048 GO:0005515
Prci9g0808 170 Pfam IQ calmodulin-binding motif 109 129 IPR000048 GO:0005515
Prci9g0808 170 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 64 IPR027417 -
Prci9g0808 170 Gene3D - 110 159 - -
Prci9g0808 170 Gene3D - 62 109 - -
Prci9g0808 170 Gene3D - 13 61 - -
Prci9g0808 170 ProSiteProfiles IQ motif profile. 60 89 IPR000048 GO:0005515
Prci9g0808 170 ProSiteProfiles IQ motif profile. 131 160 IPR000048 GO:0005515
Prci9g0808 170 ProSiteProfiles IQ motif profile. 35 64 IPR000048 GO:0005515
Prci9g0808 170 SMART iq_5 59 81 IPR000048 GO:0005515
Prci9g0808 170 SMART iq_5 34 56 IPR000048 GO:0005515
Prci9g0808 170 SMART iq_5 107 129 IPR000048 GO:0005515
Prci9g0808 170 SMART iq_5 130 152 IPR000048 GO:0005515
Prci9g0808 170 SMART iq_5 82 104 IPR000048 GO:0005515
Prci9g0808 170 SMART iq_5 5 33 IPR000048 GO:0005515
Prci9g0808 170 ProSiteProfiles IQ motif profile. 14 38 IPR000048 GO:0005515
Prci9g0808 170 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 160 IPR027417 -
Prci9g0808 170 ProSiteProfiles IQ motif profile. 108 134 IPR000048 GO:0005515
Prci9g0808 170 PANTHER MYOSIN 1 114 - -
Prci9g0808 170 FunFam unconventional myosin-Va 110 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0808 Prci-Chr9 22782958 22786694 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0808 1 166 Myosins gene family AT5G20490 68.072 4.52e-65 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0808 K10357 - pcin:129319911 327.405