Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0801 ATGGGCAGAGGGAAAATAGGCTTAATCAGGTTCTGGGGCTTAGTGCTCCTCACTCTTCTATATCTAACACACCAAGCAATGAGTACTAAGGATCGGAGCAAAACTTGCACTCCGTCTCATTGCGGCATTATCGCAAACATCTCGTATCCATTTCGCCTGAGAGATGATCCAGCGAACTGCGGCGACCACGTATACGAGTTAGCCTGTGAAAACAACGTCACTCTGCTTCATCTGTATTCAGGAATATACCAGGTTATGGGAATCAACTACAACAACTACACAGTCCGACTCAAAGATCCAGGCATTCGGGAGGGTGATTGCTCCTCCCTCCCTCGTTATTTCTTATCCCGATCTAATTTCACCGACAGTTATAACTTTTCCTACGATTATGATAGCAATCATCCCTATCTTGTCGCTGTGGAACCATCAAACGATTCAAAACTTACATTCGACCACGTCATTTACCTGCACTGCAGCGATCCGGTGAGGGACGATCCACTCTACGCAGATACAGCGCCATGCGTAGGTAGGGAATCCAGAAGAGCAGGAGAAGGAGGAGGCCATGTTTATGCTGTGGTTGGAGACTTAGGAGCTGGCAGGTTGAAACCTGAGTGTCGTGTGAAATCAGTGGCCACCATTACTTCAGATTGGAGTTCATTCCTGAAAGGAGAAAGCTTCTCGTACGCTGATATTCACAGAGTGTTTTCCTATGGTTTTGAGATTTCATGGTGGAAAAAAGCTTGCTCTGATCTTCCTTGTCCAGCTAACGAGTATTGCTTGTTCGACAATAACGAGCAGAAGGTCCTTTGCACAAAATCTGAGTACTACTGTTACCGTTTCAACGAATTACCTTTTCCTCTCTTCTGCGGAAAGGCGGCACATCTGAGCTATCGTGTGCAAGCATATCTTGTTGGTATTCTTGCAGGTTTGCCATTTTTTAAGGATATTCATTGGATTGCAGATTCAGTGTATTCAACAATTGAGTCCCAGGCTGAGCATAACGGTGGGAGCAATTTCAATTCAACACATGTTGCTTTCGACTTAGGAAAAATCACAGGAAGATATGTTTTGCCATTCACTATTCTAATTATTCTAAGATTCCTGGTTGGTATATTTTTTCTGTCCATCTTGTTGATTTACACATGTCGGAGGAGGCACTTATCTGGGTATGAAAACATTGAAGATTTCATACGCCTTCATCACAACCTTCATCCTTTGAGGTACTCCTACAAGGATTTGAAGACAATGACAAAAGGTTTCAAGAATAAGATTGGTGAAGGAGGCTTCGGCACTGTATACAAAGGCAAGTTAAGGAGTGGATCTGAAGTTGCCATTAAAATGTTGGGTAAATCCAAAGCTACTGGCCAAGAATTTATCAGTGAAGTGGCAACTATTGGGAGGATACACCATTTTAATGTGGTGCACCTTGTTGGATTTTGTGTGGAAGGAATGAAACGTGCTCTTATTTATGAATTCATGTCTAAGGGATCTTTAGATAAATATATTTTTGCTAAAAAAGGAAGTGTTTCATTGAGTTATCGCAAAGTATATGAGATATCATTAGGTGTGGCTCGAGGGATTGCTTACCTTCATCATGGTTGTGACATGAAAATATTACATTTTGATATCAAGCCCCACAACATTCTACTTGATGACAACTTCACTCCAAAAATTTCAGATTTTGGTTTGGCAAGATTATATTCTATTGAGGATAGTATCGTAACATTGACTGCAGCAAGAGGGACAATTGGGTACATGGCCCCTGAGTTATTCTACAAGAATATTGGAGGGGTGTCTTATAAGGCTGATGTTTATAGTTTTGGAATGCTTTTGATGGAAATGGCAAACCGAAGAAGGAATTTGAATCAAGATGCAGAACATTCAAGCCAAGTTTATTTTCCCTTATGGATTTACGATCAATTTGATGAAGAGAAAGATATAGAAATGGAAGATCTAACAGAAGAAGAGAAGAATTTGGCAAAGAAAATGTTCATTGTTGCTCTTTGGTGTATACAATTGAAGCCTACTGATCGTCCTTCAATGAACAAGGTAATAGAAATGTTAGAAGCAACTGATGTTGAGAGTTTTGAAATGCCTCCAAAACCTTCTCTATATCCTAATGAAAGAGTTTTAATGGATAGCACTTCCAACTTCAGTGAGACAACATCCATTATCTCTACACAATCTCATAGTAGTCTAGGTGAGTGTGCAAATGATGGGCAATAA 2226 0.4057 MGRGKIGLIRFWGLVLLTLLYLTHQAMSTKDRSKTCTPSHCGIIANISYPFRLRDDPANCGDHVYELACENNVTLLHLYSGIYQVMGINYNNYTVRLKDPGIREGDCSSLPRYFLSRSNFTDSYNFSYDYDSNHPYLVAVEPSNDSKLTFDHVIYLHCSDPVRDDPLYADTAPCVGRESRRAGEGGGHVYAVVGDLGAGRLKPECRVKSVATITSDWSSFLKGESFSYADIHRVFSYGFEISWWKKACSDLPCPANEYCLFDNNEQKVLCTKSEYYCYRFNELPFPLFCGKAAHLSYRVQAYLVGILAGLPFFKDIHWIADSVYSTIESQAEHNGGSNFNSTHVAFDLGKITGRYVLPFTILIILRFLVGIFFLSILLIYTCRRRHLSGYENIEDFIRLHHNLHPLRYSYKDLKTMTKGFKNKIGEGGFGTVYKGKLRSGSEVAIKMLGKSKATGQEFISEVATIGRIHHFNVVHLVGFCVEGMKRALIYEFMSKGSLDKYIFAKKGSVSLSYRKVYEISLGVARGIAYLHHGCDMKILHFDIKPHNILLDDNFTPKISDFGLARLYSIEDSIVTLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMANRRRNLNQDAEHSSQVYFPLWIYDQFDEEKDIEMEDLTEEEKNLAKKMFIVALWCIQLKPTDRPSMNKVIEMLEATDVESFEMPPKPSLYPNERVLMDSTSNFSETTSIISTQSHSSLGECANDGQ 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0801 741 Pfam Wall-associated receptor kinase galacturonan-binding 36 99 IPR025287 GO:0030247
Prci9g0801 741 Coils Coil 638 658 - -
Prci9g0801 741 Pfam Protein kinase domain 421 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0801 741 Gene3D Transferase(Phosphotransferase) domain 1 493 698 - -
Prci9g0801 741 ProSitePatterns Protein kinases ATP-binding region signature. 424 446 IPR017441 GO:0005524
Prci9g0801 741 PANTHER RUST RESISTANCE KINASE LR10-RELATED 390 712 IPR045874 GO:0004672
Prci9g0801 741 FunFam serine/threonine-protein kinase PBS1-like 390 492 - -
Prci9g0801 741 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672|GO:0006468
Prci9g0801 741 SUPERFAMILY Protein kinase-like (PK-like) 398 690 IPR011009 -
Prci9g0801 741 SMART serkin_6 418 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0801 741 Gene3D Phosphorylase Kinase; domain 1 394 492 - -
Prci9g0801 741 ProSiteProfiles Protein kinase domain profile. 418 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0801 741 FunFam PR5-like receptor kinase 493 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0801 Prci-Chr9 22669400 22678866 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0801 371 729 Receptor kinase-like Gene Family AT4G18250 47.861 5.08e-106 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci9g0801 Pkinase 1.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0801 - - pcin:129321062 969.918