Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0800 ATGGCAAGAGAAAAAGGCTTGAGGCCTTGGTGTTTAGTGTGGTCCACGTTGCTTCTAATGCATCGTGTTATGAGCTCTCAAGAGCAGGACAAATCCTGTAGTCCGTCTCGGTGCGGCATTATCACAAACATCAGAAATCCATTTCGACTACGAAATGATCCAGCCAAGTGCGGTGACCCCAAATACGAGTTAGCCTGTGAGAACAACATCACTCTCCTTCCTTTGAAAAATGGAGCATACAGAGTGCTGGGAATCAACTACAACGACTTCACAATCCGAATCGTAGATCCTGGCCTCCAGGAGGGAAATTGCTCCTCTTTCCCTCGCTATTTCTTATCACCATCCAATTTCAGCTATTACGACGCTGCTTATGACGCGTATGGATCGGAACCTATATTCAAGCAGGTGGTGTACCTGAAGTGCGGCGATCCAGTGAGGGGCGACGCCGCGTACGTGGATACAGCTCCCTGCGTAAATTGGGAATCCAAAGGAGAAGGAGGTCATCTCTATGCCGTAGCCGGAGACTTAGCGGCAGGCGACTTCAAATCAGGGTGTCGTGTGAAAATGGTGGCCGCCATTGCCTCAGATTGGGAGTCATTGGTGCCTGGTGGAATCAAGTCCTACGCTGACATTCACACACTGCTTTCCTATGGCTTTGAAATTGACTGGTCGTCCTGGTTCGACCAAGCTTGTGCCGCTCTTCCTTGTCCACACAACAATGACTGCAGTTTCGGTCCTGACGCTCAAACCCTCCAATGTCTGCCTCGTCCGACAAATTGTAATAGTCCCATGGCGATAGATAATATCGGTTGCCCACATCTGCCAAAGACGCGCATATTTGCAGAAGATTATATATACGGAATTTATAAAGGATTTCGCCAAATAGTGAAGATGGGGACTTACCATCACTATAGTGACTATGATTTTAGTCTAACAAATATTGGAATCACATTAGGAATAGCTACTGGAAGGGTTGTTTTGCCAGTCATCACAACCAGATTTTTATGTGGTATCATATTCCTATCTGTGTTGTTAATATATACATGTCGTAGAAGACACTTATCAATGTATGAAGACATTGAAGATTTTATACGACTTCATAACTTCATTCCAATAAGGTATTCCTACAAGGAATTGAAGACAATGACCAAAGGTTTCAAGAATAAGTTAGGTGAAGGAGGCTTCGGCACTGTTTACAAAGGGACACTAAGGAGTGGACCCGAAGTTGCTGTCAAAATGTTGGGCAAATCCAAAGCTAATGGCCAAGAATTTATCAATGAAGTAGCAACTATTGGGAGGATACACCATTTCAATGTGGTACATCTTGTTGGGTTTTGCCTAGAAGGAACAAAACGTGCTCTTGTCTATGAATTCATGCCCAAAGGGTCTTTGGATAAATATATTTTTTCTAAAGAAAGCATCTCCTTGAGCTATCACAAAATATATGAGATATCTTTAGGAGTGGCTTATGGAATTGCTTATCTTCATCATGGTTGTGACATGCAAATATTGCATTTTGACATCAAGCCCCATAACATTCTTCTTGATGAAAGCTTCACTCCAAAGATTTCGGATTTTGGACTGGCAAGATTATATGATATTGATGATAGTATTGTCACTTTGACTGCAGCAAGAGGAACGATAGGGTACATGGCTCCTGAGTTATTCTACAAGAATATTGGGGGTGTGTCTTATAAGGCTGATGTATATAGTTTTGGGATGCTTCTAATGGAAATGGCAAGTCGAAGAAGAAACTTGAATCCACATGCAGAACATTCAAGCCAGCTTTACTTCCCGTTATGGATTTATGACCAATTTGATGAAGATAAAGATATGAAGATGGAAGATTTGACAGAAGAGGAAAAAGATTTGGCAAAGAGAATGTTCATAATCGCACTTTGGTGTATACAACTAAAACCCACTAATCGTCCTTCAATGAACAAAGTGATACAAATGTTAGAAGCGGATGATGTTAATAGTATTGAAATGCCTCCAAGACCTTCTCTGTACTCATCTGAAACAATTTTAATGGATGACATATTTGACAGTGGCCAAACAACATCCACTATCTCTTCCCATTCTCATAGTAGTCCCGATGGGGCTGCCAATGATGGGAGCTAA 2121 0.4206 MAREKGLRPWCLVWSTLLLMHRVMSSQEQDKSCSPSRCGIITNIRNPFRLRNDPAKCGDPKYELACENNITLLPLKNGAYRVLGINYNDFTIRIVDPGLQEGNCSSFPRYFLSPSNFSYYDAAYDAYGSEPIFKQVVYLKCGDPVRGDAAYVDTAPCVNWESKGEGGHLYAVAGDLAAGDFKSGCRVKMVAAIASDWESLVPGGIKSYADIHTLLSYGFEIDWSSWFDQACAALPCPHNNDCSFGPDAQTLQCLPRPTNCNSPMAIDNIGCPHLPKTRIFAEDYIYGIYKGFRQIVKMGTYHHYSDYDFSLTNIGITLGIATGRVVLPVITTRFLCGIIFLSVLLIYTCRRRHLSMYEDIEDFIRLHNFIPIRYSYKELKTMTKGFKNKLGEGGFGTVYKGTLRSGPEVAVKMLGKSKANGQEFINEVATIGRIHHFNVVHLVGFCLEGTKRALVYEFMPKGSLDKYIFSKESISLSYHKIYEISLGVAYGIAYLHHGCDMQILHFDIKPHNILLDESFTPKISDFGLARLYDIDDSIVTLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASRRRNLNPHAEHSSQLYFPLWIYDQFDEDKDMKMEDLTEEEKDLAKRMFIIALWCIQLKPTNRPSMNKVIQMLEADDVNSIEMPPRPSLYSSETILMDDIFDSGQTTSTISSHSHSSPDGAANDGS 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0800 706 SMART serkin_6 384 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0800 706 ProSitePatterns Protein kinases ATP-binding region signature. 390 412 IPR017441 GO:0005524
Prci9g0800 706 SUPERFAMILY Protein kinase-like (PK-like) 368 654 IPR011009 -
Prci9g0800 706 MobiDBLite consensus disorder prediction 686 706 - -
Prci9g0800 706 Gene3D Transferase(Phosphotransferase) domain 1 459 663 - -
Prci9g0800 706 PANTHER RUST RESISTANCE KINASE LR10-RELATED 357 673 IPR045874 GO:0004672
Prci9g0800 706 Pfam Wall-associated receptor kinase galacturonan-binding 33 96 IPR025287 GO:0030247
Prci9g0800 706 FunFam PR5-like receptor kinase 459 664 - -
Prci9g0800 706 ProSiteProfiles Protein kinase domain profile. 384 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0800 706 FunFam serine/threonine-protein kinase PBS1-like 354 458 - -
Prci9g0800 706 Gene3D Phosphorylase Kinase; domain 1 361 458 - -
Prci9g0800 706 Pfam Protein tyrosine and serine/threonine kinase 386 653 IPR001245 GO:0004672|GO:0006468
Prci9g0800 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0800 Prci-Chr9 22646766 22654813 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0800 10 675 Receptor kinase-like Gene Family AT5G38260 33.824 1.32e-111 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci9g0800 PK_Tyr_Ser-Thr 2.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0800 - - pcin:129321062 832.402