Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0798 ATGAATTACGATTCCAACTACCTGTTGGTTTTTTTTTTGGGCCAAATCCAACTACCTGTTGTTGAAAAGCACAAAACCAGGAAGATATTTAGAGTTGCTTTACCAGCTACAGGTTCAATTGTTCTGATGTTGATGTTCATTGCGTGCTTTGGCATATTTCGCTACTTCAAACAGAAAGGAGATGATCAAGCAAGACTCGAAAAGTTTCTGGAGGATTATAATGCACTGAAGCCTACTAGATTCTCACACGCTGATATCAAAAGAATTACAAATAATTTTAAGGACAAATTAGGTGAAGGAGCTCATGGAACAGTCTTTAAAGGTAAGTTATCTACTGAAATTCAAGTGGCTGTCAAAGTACTCAATAATTTAAACAACAATGGTAATGACTTCATTAATGAGGTGGGGATCATAGGCAAAATTCATCACATCAATGTTGTTCGTCTGTTGGGTTTTTGTGCTGATGGCTTTTACCGTGCTCTTGTTTATGACTTTTTTCCAAATGGTTCCCTCCAAAAGTTCATATCTACTCCAGACAACAAAGAAAATTTTCTTGGATGGTTAAAGCTACAGCAAATAGCTCTTGACATAGCCAAGGGGATTGAATATCTTCATCAAGGTTGTGATTACAGAATTCTTCACTTTGACATTAATCCTCATAATGTGTTATTAGATCTCAATTTTACTTCTAAAATTTCTGATTTTGGTCTAGCTAAATTGTGTTCTAAAAATCAAAGTACGGTGTCAATAACAGCAGCAAGAGGAACTTTAGGTTATATTGCACCAGAAGTTTTCTCTCGAAACTTTGGAAATGTGTCATATAAGTCAGATATCTACAGTTATGGAATGTTATTATTAGAAATGGTTAGTGGAAGGAAAAATGTTGACACAAGTAAAAAAACTTTGCAAGTTCTATACCCAGAATGGATCCATAATTTGATTGAAGGAGGAGATATAAATATTTGCATAGAAGATGAAGATGACATGAGGATTGGAAAGAAACTAGCAATTGTGGGACTTTGGTGTGTTCAATGGCATCCGATAAATCGTCCATCTATAAAAACAGTTATGCAAATGCTTGAAGGAGATGTAGATAAATTAAAACTGCCTCCCACTCCATTTAACTTTGGTGGATCAGCTAGTACAAGTACCATTGTTCCTCCGAGACACTTGAATTTAGAGTTAAAAGTGATTCATGAATTAGAATAA 1209 0.3499 MNYDSNYLLVFFLGQIQLPVVEKHKTRKIFRVALPATGSIVLMLMFIACFGIFRYFKQKGDDQARLEKFLEDYNALKPTRFSHADIKRITNNFKDKLGEGAHGTVFKGKLSTEIQVAVKVLNNLNNNGNDFINEVGIIGKIHHINVVRLLGFCADGFYRALVYDFFPNGSLQKFISTPDNKENFLGWLKLQQIALDIAKGIEYLHQGCDYRILHFDINPHNVLLDLNFTSKISDFGLAKLCSKNQSTVSITAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVSGRKNVDTSKKTLQVLYPEWIHNLIEGGDINICIEDEDDMRIGKKLAIVGLWCVQWHPINRPSIKTVMQMLEGDVDKLKLPPTPFNFGGSASTSTIVPPRHLNLELKVIHELE 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0798 402 ProSiteProfiles Protein kinase domain profile. 91 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0798 402 Pfam Protein kinase domain 94 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0798 402 FunFam PR5-like receptor kinase 166 371 - -
Prci9g0798 402 FunFam serine/threonine-protein kinase PBS1-like 59 165 - -
Prci9g0798 402 SUPERFAMILY Protein kinase-like (PK-like) 74 361 IPR011009 -
Prci9g0798 402 ProSitePatterns Protein kinases ATP-binding region signature. 97 119 IPR017441 GO:0005524
Prci9g0798 402 PANTHER RUST RESISTANCE KINASE LR10-RELATED 65 379 IPR045874 GO:0004672
Prci9g0798 402 Gene3D Transferase(Phosphotransferase) domain 1 166 368 - -
Prci9g0798 402 Gene3D Phosphorylase Kinase; domain 1 66 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0798 Prci-Chr9 22590455 22594871 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0798 5 373 Receptor kinase-like Gene Family AT1G66910 42.559 6.88e-100 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci9g0798 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0798 - - tpra:123893290 535.798