Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0797 ATGGGTATAGAGAAAGGCTTGATGTGTTGGAATTTAGTGTGGTACGCACTGCTTCTAATAACGCAAAGAGTAATAAGTTCTCAAGATCTGAACAATACCTGTGCTCCGTCTCGCTGCGGCATTATCACAAACATCTCACATCCATTTCGACTACCAGATGACCCGGCGAACTGCGGCGACCCCAGATACGAGTTAGCCTGTGAAAACAACGTCACTCTCCTTCATTTATATGACGGAAAATTCCCTGTTCTGGCAATAAACTACAACAATTACACAATCCGACTCGTAGATCCAGGCATTCAGGCGGACAATTTCTCCACCCTCCCTCGCTATTTCTTATTCCGATCTAATTTCAGCCGTAAGGGATACAAACATCCCTATGGCACATCTCTGAGCAGTGAACCTACATTCGAGCACGTGGTGTATTTGAATTGCAGCGATCTAGTTTGGAAGGAACGGATCAGATTCTTCCGAGATTCACTCGCCTGGAGAGAATACACAGACACAGGCGTCGTAGCCGACGCAAATTGGGAATCCGAAGGAGGTCATGTTTACGCTGTGGTTGGAGACTTGAAGGCCAATCAGTTCAAATCTGGGTGTGATGTGAAAATGGTGACCCTCATTACTTCACATTGGGATTCACTGCTACATATGGGAAACTTCTCCTATGCTGATATTCACAGACTGCTTTCCTATGGATTTGAGGTTTCATGGGAGGAACGAGCTTGTGCTGATCTTCCTCCTTGTCCATTTAGTTATCAGGACTGTAATTTCAGCCCTGAAACTAAAAGCCTGCAATGCACTCCGAATCGGACGTTCATCCAGAATCTAAACTTCTGCATCGGTCCCATGATGGAAATATATGAAATCCCGTGCCGAAGGCTCTCAAAGTTGCGCATATTTGGCGAAGATTATCTCCATGGGATTCGAAAAGGAATACAACTACTGCTAAGGAGGGATTCATCGGAATGGGATTATAGAAGTGGCTACAATTTTAGTCTATCAACTCCCACAATCGAATTAGGAATAGTCACTGCAAGAGTTGTTTTGCCATATATCACAGCCAAATTTTTATTTGGCATCATATTCCTATCTGCATTGTTGATTTATACATGCCGTAGACGACACTTATCAATGTATGAAGACATTGAGGAATTTATACGGCTTTATAACCTCACTCCAATAAGGTACTCATACAAGGAATTGAAGACAATGACTGAATGTTTCAAGAATAAGTTAGGCGAAGGAGGTTTTGGCACTGTGTACAAAGGAAAGCTAAGGAGTGGACCTAATGTTGCTATCAAAATGTTAGGTAAATCCAAAGCAAATAACCAAGAATTTATTAGTGAAGTGGCTACTATTGGAAGGATACACCATTTCAATGTGGTACATCTTGTCGGATTCTGTGTGGAAGGAACAAAGCAGGCTCTTGTCTATGAATTCATGTCCAATGGCTCTTTGGATAAATTTATATTTTCCAAACAAGAAAGTGACTCCTTGAGTTATCACAAAATATATGAAATATCATTAGGCATAGCTCGTGGGATTGCTTATCTTCATCATGGGTGTAACATGCAAATATTGCATTTTGATATCAAGCCCCATAACATACTTCTAGATGATACCTTCACTCCAAAAATTTCAGATTTTGGTCTAGCAAGATTATATTCTGTCAATGACAGTGTTGTCACTTTGACTGCAGCAAGAGGAACAATAGGATACATGGCTCCTGAATTATTCTATAAAAATATTGGTGGAGTGTCCTATAAAGCTGATGTTTACAGCTTTGGAATGCTTTTAATGGAAATGGCAAGCCGAAGAAGGAATTTGAATCCACATCTAGAACATTCAAGCCAACTTTATTTTCCTTTATGGATTTACGATCAATTTGATGAAGAGAAAGATATAGAAATGGAAGGTTTGACACAAGTGGAAAAGGACTTAACAAGAAAAATGTTCATAGTAGCACTTTGGTGTATACAACTAAAACCTATTGATCGCCCTTCAATGAATAAAGTAATAGAGATGTTAGAAAATGATGTCGAAAGTCTTGCTATGCCTCCAAAACCTTCTCTGTATCCTAATGAAATAGTTTTAATGGATGATGGATCTAACTCCAACCAAACAACATCCACTGTCTCTGTACATTCTCATAGTCGTCCAGGCGAGGGGGCAAGTAATGGGAAGTAG 2190 0.4023 MGIEKGLMCWNLVWYALLLITQRVISSQDLNNTCAPSRCGIITNISHPFRLPDDPANCGDPRYELACENNVTLLHLYDGKFPVLAINYNNYTIRLVDPGIQADNFSTLPRYFLFRSNFSRKGYKHPYGTSLSSEPTFEHVVYLNCSDLVWKERIRFFRDSLAWREYTDTGVVADANWESEGGHVYAVVGDLKANQFKSGCDVKMVTLITSHWDSLLHMGNFSYADIHRLLSYGFEVSWEERACADLPPCPFSYQDCNFSPETKSLQCTPNRTFIQNLNFCIGPMMEIYEIPCRRLSKLRIFGEDYLHGIRKGIQLLLRRDSSEWDYRSGYNFSLSTPTIELGIVTARVVLPYITAKFLFGIIFLSALLIYTCRRRHLSMYEDIEEFIRLYNLTPIRYSYKELKTMTECFKNKLGEGGFGTVYKGKLRSGPNVAIKMLGKSKANNQEFISEVATIGRIHHFNVVHLVGFCVEGTKQALVYEFMSNGSLDKFIFSKQESDSLSYHKIYEISLGIARGIAYLHHGCNMQILHFDIKPHNILLDDTFTPKISDFGLARLYSVNDSVVTLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASRRRNLNPHLEHSSQLYFPLWIYDQFDEEKDIEMEGLTQVEKDLTRKMFIVALWCIQLKPIDRPSMNKVIEMLENDVESLAMPPKPSLYPNEIVLMDDGSNSNQTTSTVSVHSHSRPGEGASNGK 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0797 729 Gene3D Transferase(Phosphotransferase) domain 1 482 686 - -
Prci9g0797 729 ProSitePatterns Protein kinases ATP-binding region signature. 413 435 IPR017441 GO:0005524
Prci9g0797 729 Pfam Wall-associated receptor kinase galacturonan-binding 34 97 IPR025287 GO:0030247
Prci9g0797 729 MobiDBLite consensus disorder prediction 700 729 - -
Prci9g0797 729 SMART serkin_6 407 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0797 729 FunFam PR5-like receptor kinase 482 689 - -
Prci9g0797 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Prci9g0797 729 Pfam Protein tyrosine and serine/threonine kinase 409 677 IPR001245 GO:0004672|GO:0006468
Prci9g0797 729 SUPERFAMILY Protein kinase-like (PK-like) 390 677 IPR011009 -
Prci9g0797 729 ProSiteProfiles Protein kinase domain profile. 407 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0797 729 Gene3D Phosphorylase Kinase; domain 1 373 481 - -
Prci9g0797 729 PANTHER RUST RESISTANCE KINASE LR10-RELATED 380 702 IPR045874 GO:0004672
Prci9g0797 729 FunFam serine/threonine-protein kinase PBS1-like 377 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0797 Prci-Chr9 22575449 22590864 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0797 359 693 Receptor kinase-like Gene Family AT5G38260 45.714 1.55e-99 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci9g0797 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0797 - - pcin:129321062 786.949