Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0796 ATGCTGAGCGCCAATCTTCCTGAAGAAATTGTAGAGGATATCGCAGCGAGGCTACCAGTGAAATCCCTGCTTCGATTCAAATCAGTGGCGAAATCCTGGTACGCACAAATCACTGATCCATATTTTGTAACGAGACAATTTGAATGCTCTGATTTGATCACCAAAAACCATCGTCTCCGGCTGATCTCCCGATTGCACTATCTCACTCTGAAGCCTTGCATTTCCCTAGTTTCCAACCAGGAATCCGACGATATAGAATTGCCATTCCCCGAGAAGAATGTGGAATACATATTTTTTTATGGTCAATGTAATGGGATTTTCTGTCTCTATGGGGTCTATGGAGAAGATAGTGCTGGTCAGGCCAGCTTGATTCTGTGGAACCCAGGGACAAAAGAGGTGAAGATCCTTCCTGCATCTCAGAACCAACCCAAAGACATGGTTTATGTCATATTTGGGTTTGGGATTGATCCCATTACAAAGGACTACAAGGTTGTTCGATTTGGGAATTTGGCTTTTGAAGGAAGAGAACAACCTCCAGTTGAGGTGTATAATCTCAGTACTGATTCTTGGAGAACCATTGATGCTATTGTCCCTGCTTTTCGATTGTGTTATCCAAAATGTAGGGCTTATTTGAATGGTGTTTATCATTGGCTAACTGATGATAACAATGATCAGGCCATTTTGTGCTTTGATTTCAGCAAAGAGGTGTTTGGGAAGATCCAATTGCCTCCTGCAAAAATTGACGAGTCTCATGAATTAACTGTTGCTGTAATTGATGAGAGGCTTGCCTGTGTTGATACATTTTGCATGACCAATTACAAGTTTGAGATTTGGGTGATGAATGAGTATGGTGTTGACAGCAGCTGGGCTAAGAAGTTTGTAGTTGGACCATGCCCTGAGTTTGGTTCATTTCTAGGATTTTGGGGAGATGATGAGATTCTTGTTGAAGATGAAGGTCAATTGGTTTCATATAATCTTGGGAATAAGAAAATACAGAGGTTTGAAATTCATGGAGTTCCAAAGCTATTCAGAATGTTTGAGTATGTGGAAAGTTTGGTTTCTTTGAAGAACTAA 1074 0.4088 MLSANLPEEIVEDIAARLPVKSLLRFKSVAKSWYAQITDPYFVTRQFECSDLITKNHRLRLISRLHYLTLKPCISLVSNQESDDIELPFPEKNVEYIFFYGQCNGIFCLYGVYGEDSAGQASLILWNPGTKEVKILPASQNQPKDMVYVIFGFGIDPITKDYKVVRFGNLAFEGREQPPVEVYNLSTDSWRTIDAIVPAFRLCYPKCRAYLNGVYHWLTDDNNDQAILCFDFSKEVFGKIQLPPAKIDESHELTVAVIDERLACVDTFCMTNYKFEIWVMNEYGVDSSWAKKFVVGPCPEFGSFLGFWGDDEILVEDEGQLVSYNLGNKKIQRFEIHGVPKLFRMFEYVESLVSLKN 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0796 357 Gene3D - 3 45 - -
Prci9g0796 357 NCBIfam F-box protein interaction domain 101 313 IPR017451 -
Prci9g0796 357 ProSiteProfiles F-box domain profile. 1 47 IPR001810 GO:0005515
Prci9g0796 357 SUPERFAMILY Galactose oxidase, central domain 120 327 IPR011043 -
Prci9g0796 357 Pfam F-box domain 5 42 IPR001810 GO:0005515
Prci9g0796 357 CDD F-box_AtFBW1-like 4 42 - -
Prci9g0796 357 Pfam F-box associated 210 329 IPR006527 -
Prci9g0796 357 PANTHER BNAA05G37150D PROTEIN-RELATED 4 342 - -
Prci9g0796 357 SUPERFAMILY F-box domain 5 51 IPR036047 GO:0005515
Prci9g0796 357 SMART fbox_2 6 45 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0796 Prci-Chr9 22565760 22567205 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0796 181 305 Carbohydrate Esterase AT1G25141 27.941 2.20e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0796 - - pcin:129320976 741.11