Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0790 ATGAGATCAGTTGCTGTCGCTGTCAACGGCGGCTCCAGCGCTGGCAGGGGTAGCCGGCGAGCCGTCCAGTGGGCGTTGGAGAATCTTATGCCTCAAGCCGATAAGTTCATCTTAGTTCACGTTATGCCTATAATCACTTCTATTCCAACGCCATCTGGAGACTGTATCCCTATTATGGATCTAGATGCCAACGTGGCAACAGCTTACGTACAGGATGTGAAGGAGAAGTTCGAGAAAATCTTTATTCCATTCAAGAAACTCTGCAAAGCGGGCACAGTTGAAACTTTATTGCTAGAAGATGACAATCCTGCAACCGCACTACTTAAATATATATCCGAATCAGAGATTCAAATATTAGTGTTGGGAACTGACTCTTCAAATTTTTTAACAAGGAAGCTAAAAGGACCAGGGATACCAACGACCGTTCTAAGATGTGCCCCAGACACTTGTGACGTATATCTTGTAGCTAGAGATAGAACTATATCAAAATTAGCTGATTCTTCGTCTTCTCCTCCATGTGAGACTAGCTCTAGCTACTTCATGTCTGCACAAGGCAATAAAGGAGACGTCAATGCTGGCTTTGGTAGAGAAATGACTGGACTCAATTCTTCCGCAAGAGGACCTGAATTTCTCACAAACATATTCCCATCAATGTCAGAGTGGAGTTTCATAGGTTCGCAAACATCTACTCCCGCATATTCTCTTAAAAATCCCACTATAAATGAAGACAATCTAGAGAGCTTAGAGATGATGCTGAAACTGCAAGCATCTACTCATTTGATTCCATGGCTTCTGCACAATGTGAAGAATCATGCAAGAAGTAAGCAGCTGCAGCTGGAGTTACAGAGTACTATTGTCATGTATAAACAGGTTTGTCAAGAGTTGGCTCTTGCTCAAAGTAAGGTTCATTTACTTTCATCTGAATGTCTTGAAGAATCAAGAAGAGTAAATGATTCCCTGAAAAGAGAGGAGACTTTGAGAAAGATTGCTGCTGAAGAAAAAGAAAAGTATTTAAAAGTCATGAAGGAACTTGAGGAGGCAAAAATTAAGTACGCAAAAGAATCATATGAAAGGCAGATGGCTGAACTTAATGTCCTCAAAGAATCCGTAGAAAGGAAGAGAATAATTGATACATTGCTCTCAAGTGACAAGAGGTACAGAAAGTACACTATGGACGAAATTACAGAAGCAACAAACAACTTCTCTGAGGATCTTTTAATTGGTGAAGGAGGTTATGGGAAGGTTTATAAGTGCAGCCTTGATCACACTGCAGTAGCTGTAAAGGTTCTGCACCAGGATGCAATGAACAAGAAAGAGGAGTTTCTGAAGGAGGTTGAGATTCTGAGTCAGCTACACCATCCACACATGGTTTTGCTGCTAGGAGCCTGTCCTGAAACTGGCTGCCTTGTTTATGAATACCTGGAAAATGGAAGCCTTGATGACTATCTTTCCAGTAACAGTGGGAAACCACCACTTCCTTGGTTCATTCGATTCCGTATAGCTTTTGAAGTGGCTTGTGGGTTATCATTTTTGCATAATTCAAAGCCTGAGCCAATTGTTCATCGAGACATGAAACCAGGAAACATCTTGCTGGACAGAAATTATGTGAGCAAAATTTCAGATGTTGGATTGGCTAAACTCCTTTCAGACATCATACCTGACGATATCACTGAGTACAGAGAATCTGTTCTTGCTGGGACTCTGCATTACATGGATCCAGAGTATCAGAGAACTGGCACTGTCCGACCAAAATCAGATGTATATGCATTGGGAATTGTAACTCTTCAATTGATAACTGGTCGCCACGCACGTGGAGTCATTTTGGCTGTTGAAAATGCGGTTAAAAATGGCTCCTTCTCTCGTATTTTAGATAAATCAGCTGGAGATTGGCCACTGACTGAGACAGAAGAGTTGGCTCAAATTGCCCTAAGATGCTCAGCACTGAGATGCAGAGATAGGCCAGATCTTGATACTGAAGTTCTTCCTCTACTCAAAAGAATCTGTGGTGTGGCAAATGCTACTGCAAAAGTGGGAAGAAATCGCATGTGCCAACCAAGTCAATATTATTGTCCAATTCTTCAGGAAGTAATGGATGATCCACATATTGCTGCTGATGGTTTTACATATGAGCACAGAGCAATCAAGGCATGGCTCAGTAAACACAATGTATCGCCTGTAACTAAGCTTACACTGCAGCATTCTACATTGATTCCAAACCATACCTTACGTTCTGCCATTCAGGAGTGGAAATCGGGACAGAAGTGA 2265 0.4185 MRSVAVAVNGGSSAGRGSRRAVQWALENLMPQADKFILVHVMPIITSIPTPSGDCIPIMDLDANVATAYVQDVKEKFEKIFIPFKKLCKAGTVETLLLEDDNPATALLKYISESEIQILVLGTDSSNFLTRKLKGPGIPTTVLRCAPDTCDVYLVARDRTISKLADSSSSPPCETSSSYFMSAQGNKGDVNAGFGREMTGLNSSARGPEFLTNIFPSMSEWSFIGSQTSTPAYSLKNPTINEDNLESLEMMLKLQASTHLIPWLLHNVKNHARSKQLQLELQSTIVMYKQVCQELALAQSKVHLLSSECLEESRRVNDSLKREETLRKIAAEEKEKYLKVMKELEEAKIKYAKESYERQMAELNVLKESVERKRIIDTLLSSDKRYRKYTMDEITEATNNFSEDLLIGEGGYGKVYKCSLDHTAVAVKVLHQDAMNKKEEFLKEVEILSQLHHPHMVLLLGACPETGCLVYEYLENGSLDDYLSSNSGKPPLPWFIRFRIAFEVACGLSFLHNSKPEPIVHRDMKPGNILLDRNYVSKISDVGLAKLLSDIIPDDITEYRESVLAGTLHYMDPEYQRTGTVRPKSDVYALGIVTLQLITGRHARGVILAVENAVKNGSFSRILDKSAGDWPLTETEELAQIALRCSALRCRDRPDLDTEVLPLLKRICGVANATAKVGRNRMCQPSQYYCPILQEVMDDPHIAADGFTYEHRAIKAWLSKHNVSPVTKLTLQHSTLIPNHTLRSAIQEWKSGQK 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0790 754 Pfam Protein tyrosine and serine/threonine kinase 406 657 IPR001245 GO:0004672|GO:0006468
Prci9g0790 754 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 684 754 IPR013083 -
Prci9g0790 754 CDD RING-Ubox_WDSUB1-like 685 739 - -
Prci9g0790 754 ProSiteProfiles Protein kinase domain profile. 401 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0790 754 ProSiteProfiles U-box domain profile. 683 754 IPR003613 GO:0004842|GO:0016567
Prci9g0790 754 CDD STK_N 3 157 - -
Prci9g0790 754 Gene3D Transferase(Phosphotransferase) domain 1 474 681 - -
Prci9g0790 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 519 531 IPR008271 GO:0004672|GO:0006468
Prci9g0790 754 Gene3D HUPs 1 155 IPR014729 -
Prci9g0790 754 SUPERFAMILY RING/U-box 685 750 - -
Prci9g0790 754 ProSitePatterns Protein kinases ATP-binding region signature. 407 428 IPR017441 GO:0005524
Prci9g0790 754 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 374 473 - -
Prci9g0790 754 SUPERFAMILY Protein kinase-like (PK-like) 384 657 IPR011009 -
Prci9g0790 754 SMART serkin_6 401 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g0790 754 Gene3D Phosphorylase Kinase; domain 1 380 473 - -
Prci9g0790 754 Coils Coil 327 373 - -
Prci9g0790 754 SMART Ubox_2 687 749 IPR003613 GO:0004842|GO:0016567
Prci9g0790 754 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 155 - -
Prci9g0790 754 Pfam U-box domain 685 752 IPR003613 GO:0004842|GO:0016567
Prci9g0790 754 PANTHER OS02G0152300 PROTEIN 4 748 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0790 Prci-Chr9 22520815 22526920 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0790 3 751 Plant U-box Gene Family AT5G57035 54.793 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Prci9g0790 PK_Tyr_Ser-Thr 1.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0790 - - gmx:100805896 1048.11