Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0729 ATGGAGGAGAATCACAAGAGAGAACCAGACTTCAAGTCGTCTTCTTCTTTCTCGTCCTCCATGGCAACAACATTTGCCGATGAGCAATTACAATTCCTTTGGGTTCAAGGACTTGTTGGGCGTCCAGGATTACGGTACCCCTTCTTTGTTCGATTGGGTTCCGCCACTGCCGCCACCGGAGCCACTACCACGGTGTCGCCCGTCGTAGGTGATGCAGTCCTCCAGTCCCTACCATCGCAGGTGAGCTCCGGCGGGGTGCTGAATACTCCGGCCACCCCGAATTCCTCGTCACTCTCATCCTCATCAAACGACGCGGCCACCGGCCCCAACAGTGGCGGCTGCGGCAGTGCGATGGAAGAACAGCAGAATTGTAAAGCAGAGGATGAAGATGTGGACGGAGGAAGAGGAGAGGACCAAGAACAAGACAAATCTAAGGAACAGGTGAAACCAAAGAAGAAGAAGCAAAAGAAGGAAAGACAGCCGAGATTTGCGTTCATGACAAAGAGCGAAGTGGATCACCTCGACGATGGCTATAGGTGGCGCAAGTACGGCCAAAAAGCTGTCAAGAACAGCCCTTTTCCCAGGAGCTATTATCGGTGCACGACGGCTGGTTGCGGCGTGAAGAAGAGGGTGGAGCGATCATCGGACGACCCTACCGTCGTGGTGACGACCTACGAGGGGCAGCACAAGCACCCAAGTCCGGTGGCGGCAGCGGCGATTCGGGCGGGCTTTGGGTACGGCGGCGGCGGTTTTGGTTCGACGCACTTGGTGGTTCCACAGGCGCAGATGATGAATGTGTCGTCGTCTTCGCCGCCGCCATTGTTGTATAACTCAAGCTCGTCGTCGTTGGGAATTGGATCTAGCAGCTACATGAACATGAATTCATCGACGACGTCGTTTTTGAGCTCTTATCATAACAGCAACAGATCAGATTTTGGAGTTCTAGAGTCTAGAATCGATGAAGCTACTAGCTTTTTAAGAGACAATGGGCTTCTTCAGGACATTATTGTGCCATCGCAGATGATGATGAGGAACAAGGATGATGAAAAGCGGCGATATAATTGTACTGGGTAA 1074 0.5261 MEENHKREPDFKSSSSFSSSMATTFADEQLQFLWVQGLVGRPGLRYPFFVRLGSATAATGATTTVSPVVGDAVLQSLPSQVSSGGVLNTPATPNSSSLSSSSNDAATGPNSGGCGSAMEEQQNCKAEDEDVDGGRGEDQEQDKSKEQVKPKKKKQKKERQPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPFPRSYYRCTTAGCGVKKRVERSSDDPTVVVTTYEGQHKHPSPVAAAAIRAGFGYGGGGFGSTHLVVPQAQMMNVSSSSPPPLLYNSSSSSLGIGSSSYMNMNSSTTSFLSSYHNSNRSDFGVLESRIDEATSFLRDNGLLQDIIVPSQMMMRNKDDEKRRYNCTG 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0729 357 SMART WRKY_cls 174 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci9g0729 357 MobiDBLite consensus disorder prediction 83 163 - -
Prci9g0729 357 FunFam WRKY transcription factor 57 160 234 - -
Prci9g0729 357 SUPERFAMILY WRKY DNA-binding domain 166 234 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci9g0729 357 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 89 287 IPR044810 GO:0003700
Prci9g0729 357 MobiDBLite consensus disorder prediction 122 148 - -
Prci9g0729 357 Gene3D WRKY domain 158 235 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci9g0729 357 MobiDBLite consensus disorder prediction 83 118 - -
Prci9g0729 357 Pfam WRKY DNA -binding domain 175 232 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci9g0729 357 ProSiteProfiles WRKY domain profile. 169 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0729 Prci-Chr9 21942733 21945024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0729 144 342 WRKY Transcription Factor Family AT2G47260 48.276 2.00e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci9g0729 WRKY 8.3e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0729 - - pcin:129319667 588.186