Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0712 ATGGTTTCTTTGTCATCTTCATTGTTCATAATAAAACCATTTTTGTGTTTCATTTTGTTGTTCTTGGCCACATTCCCTAGTTATGTTCTTGGGGCCATCGAGGTTCAAGATTTAGTCATAGATTCTCCTTTATTAACAAAAAATATTCCCACGAATCGAACCATTAAGGTCGACGACGAAGGCGAAGGCGAATTCAAATCCATCCAAGCCGCCATAGATTCTATTCCTGAAGGAAATTCTCAGTGGGTCATCGTCCATGTTAGGAAAGGAGTATACAGAGAGAAGATAACGATACCGAAGAGCAAGCCGTATATATTCTTGAGAGGAAATGGAAGAGGAAAAACTGCGATAGTTTGGTCTCAGAGTTCTATTGATAATATAGAGTCAGCAACTTTCAAAGTCGAAGCTCATGACGTCATTATCTTTGGAGTCAGCATCAAGAACGAGGCACCTACTGGGGTTGCTTATACATCACAGAATCAATCAGTAGCAGCATTTGTAGGAGCAGATAAAGTGGCATTCTATCACTGTGCACTTTACAGTACTCACAATACTCTCTTTGATTACAAAGGCAGACATTACTATGAAGAATGTTACATTCAAGGTTCTATTGATTTCATCTTCGGCCGTGGTAGATCCCTCTTCCATAAATGTGAGATATTTGTGATAGATGACAAGAGGACAGCGATAAAGGGGTCAATCACAGCACAGAACAGAGAGTCCGAATCAGAGGCAAGTGGGTTTGTGTTCGTGAAAGGGAAGGTGTATGGCATTGGTGGGACCCACCTAGGGAGGGCAAAGGGTCCTTATTCGAGGGTCATCTTTGCCAAAGTCTATCTCTCTGCCACTGTTGTTCCTGAGGGCTGGGCCCACTGGAGCTATGCCGGCTCCACAGAGCACTTATACCATGGGGAGTACAAGACCTTTGGACCTGGAGCTAATACAACAAAACGAGCTAGTTGGTCCAAACAGCTCACTGAAAAAGAAGCCGAACCCTTCATGTCTGTCGATTATATTGATGGCAAGGAATGGCTTCCTGCTTGGCTATCAACTTCATCTATATGA 1065 0.43 MVSLSSSLFIIKPFLCFILLFLATFPSYVLGAIEVQDLVIDSPLLTKNIPTNRTIKVDDEGEGEFKSIQAAIDSIPEGNSQWVIVHVRKGVYREKITIPKSKPYIFLRGNGRGKTAIVWSQSSIDNIESATFKVEAHDVIIFGVSIKNEAPTGVAYTSQNQSVAAFVGADKVAFYHCALYSTHNTLFDYKGRHYYEECYIQGSIDFIFGRGRSLFHKCEIFVIDDKRTAIKGSITAQNRESESEASGFVFVKGKVYGIGGTHLGRAKGPYSRVIFAKVYLSATVVPEGWAHWSYAGSTEHLYHGEYKTFGPGANTTKRASWSKQLTEKEAEPFMSVDYIDGKEWLPAWLSTSSI 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0712 354 SUPERFAMILY Pectin lyase-like 51 348 IPR011050 -
Prci9g0712 354 ProSitePatterns Pectinesterase signature 2. 200 209 IPR033131 -
Prci9g0712 354 Pfam Pectinesterase 55 341 IPR000070 GO:0030599|GO:0042545
Prci9g0712 354 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 47 345 - -
Prci9g0712 354 Gene3D - 49 351 IPR012334 -
Prci9g0712 354 FunFam Pectinesterase 49 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0712 Prci-Chr9 21743497 21746070 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0712 1 345 Carbohydrate Esterase AT5G47500 34.734 2.31e-70 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0712 - - gmx:100792967 534.643