Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0659 ATGGAACGGGGAACGAGATCGGCTGGCGCTTCCGGAGTTGTAGTGACAAACAGAAACTCTTCGGGCTGTTTAATTGTTAGAAAGAAAGGAGATAGGTTGGGTGGTGGATATGGCTCTTCTAGTAGCTCTCGGAAGCAGTATGAATCAAAGGTTAGGAAAAGGCCCAGTGTGGCTAAGAGTGATTCAGAATCAAGCGATGAGTTGCTGATGCCTCCTGTAAGAAGGCTTGGTTCTGAGACTATTCGTGTCTGTAATGGGTTGACTGCTTTTGAGCAGGGTACAGGAGAAGGGAGTGAAAGTGGTCGAAAGAGGGATGGAACGGAGCGAATCAGACATTATGAGGATTCTGTGTTTGACAATAATGATTTGGAGCAGAGGGAAACAAAGCGGAATAAACTGGACGTGTTTGATTTTGATGAATATGATGATGTACAAATGACTCGAATGAGGAAGTCTGATGATGATAACGGAATTAGTTTAGGAGCAAGAAGGTTTGTGGAACCAATGCATGATGCTTCAAGTGGCATTAAGAGGGAATGTGAAACAGGGTCAGGTAGACACATTGTTTATAGTAGAAAGAATTCTTATTATGATAGGGCTAGTAGCTTGTATGTAGAAGATAATGCTAACCAGAGCAGGTTCAATGCAAATAGGCCTGATGCTCAGCTACCTCTGTCTTTGCTGAAAAATAAGTTTAAATCAGATGAATCCATTAGGGTTCAGGGGAAAAATGGTGTTCTAAAGGTGATGGTTAATAATAAGAAGGCTGGCCCATCAGAACACTATGGTCACCGCAAACCTATGGAAAGCAAACAAAGTTTGAGGACTGAAGCCACTGCCAAGAAGAATACCATGGTCCATCCTTCACCGTATTCAAAACCAAAACTTGTTCAGAAGCCAGGTTCAGTTGTTAGGCAAGAGAAAAAGAGGATAGCATCAAAAAAATCATTTTCAATGAAGAACAATAAGGGCCGTGCTTGGGATTCAGAGGACAGTGGCTCATTATCGGATCAGGAGTTAGCAACTACTAAAACTCGCAAGTCTTTGAAGAAGGTAGGTTCTGAAGATGAACAGACTCCTTTGCGTGAGAAACTCCCAACTACAATCATGAAAGAAGGAAAAGTGAAGCGGGGTAGTGGCACTGAGAAACAGAAGCTGCGAGAAAAAATAAGGGAGATGCTCCTGAGTGCGGGATGGACTATAGATTATCGGCCTCGAAGGAATAGAGACTATCTTGATGCAGTTTACATTAATCCAGGGGGTACAGCCTATTGGTCAATCATCAAAGCCTATGATGCTCTGCAAAAGCAATTGAATGATGGTGATAATGAGGCCAAGCCCATGGTTAATGGTTCTTCCTTTGCTCACATCTCAGATGAGGTGCTGAGCCAATTAACAAGGAAAACTCGGAAAAAGATGGAGCAAGAATTGAAGAAGAAGAAAATAGATGGTAGTGAGAGTGAGAGTGACAGTGAAAAAAAACCCAACCGTAAAAGATCTGCCAGTGACAAGCATGACATGAATAGCACGGATAGTGATAGTGATGAAGAGAAATTGAGCTCTTTTATAAGGCAGGGAAGTAAGTCAATGAAAAATAAGATTTCAGAAAATGTTGTTGCCAGTGCTAGCTTTAAATCCCAGAAATCCACCCATCGCATGCATGATGAAACTGACAATTCATTGTCTGAATGTGATCCTCATCTGTCACATGGGAGGAAAAGTAGAAAACATGGAAGATGTACTTTGTTAGTTCGGAGTTCTAGCAAGGGATTGAATTCAGAATCTGGTGGTTTTGTTCCGTATACTGGCAAAAGAACAGTGCTTTCCTGGTTGATTGACTCTAGGACAGTTGCATTGAGCCAAAAGGTTCAGTATCGGAGACGAAAACGAGTAGTGCTGGAGGGATGGATTGCAAATGATGGTATTCATTGTGGCTGCTGCAGTAAAATCCTCACAGTTTCCAAGTTTGAGATTCATGCAGGTAGCAAATTGCGCCAGCCATTTCAAAACATATATTTGGATTCAGGAGTTTCTCTTCTACAGTGTCAAATAGATGCATGGAATAGACAAGAGAATTCTGAGAAAATTAGTTATCATTCTGTGGATATTGATGGTGATGATCCAAATGATGACACTTGTGGTATATGTGGAGATGGTGGGGCCTTAATCTGTTGTGATGGCTGTCCATCAACATTTCATCAGAGCTGCTTGAGTATTAAGATGCTTCCTCCTGGTGAATGGCATTGTCCAAATTGCACCTGCAAATTTTGTGCAATAGCCAGTGGGACCGTTAAAAAAGGAGATGCTGCTGCATGTGCTCTACTTACTTGCAACTTATGTGAGAAAAAATACCATGAATCTTGTGCTGAGAAGATGGATGCTCTTTCTAATAACTCTAATGTTTCGGGCTTTTCTTTTTGTGGAAAAGAGTGCAAACAGCTTTTTGAGCACTTGAAGAAGTTCCTAGGTGCCAAGCATGAACTAGAGGCAGGATTTTCGTGGTCTCTTATTCATCGAACAGATGAAGACTCAGAGGCCACTAGTAGAGGAATTTTTCAAAGGGTTGAATGCAACTCCAAGCTAGCTGTTGCACTGACTATTATGAATGAATGCTTTTTACCCGTTGTTGACCGGAGGAGTGGGATCAATTTGATTCATAATGTTTTATATAATAGTGGGTCAAACTTCAGTAGGTTGAATTATAATGGTTTTTACACTGCTATTCTGGAGAGGGGTGATGAAATCATTTCTGCAGCATCTATCAGGTTCCATGGGACTAGGCTAGTGGAGATGCCATTTATTGGAACTCGCCACATATATAGGCGTCAGGGCATGTGCCGCCGGCTTTTTTCTGCTATTGAATCGGCCCTCCGCTCTATGAAGGTTGAGATAATGATTATTCCAGCAATTGCTGAACTCATGCAAACATGGACAATGAATTTTGGGTTCACGGATCTTGAGGAATCACTTAGGAAAGAACTGAGGTTTTTGAATATTCTGGTGTTCCCTGGTATAAATATGCTACAGAAGGTGCTAGTAGAGAAAGGAAACTTTGAGGGGAACACAACTGCCTCAGGTGTTGAGAAAGTGGAAAATGCAGACAAAGTTAGCATTAAATCAAAATTGGCTGATAGGTCAGCTGATTCCTCGAATCATCAAGACCCTGATGGAAGCGCTAATATGGATTCAAATCCTGTCAACGAGATATATGATGAATGCTATGATGCTTCTGAAGAGATTAAAAATCAAGTTTTATCTGACAGGACTGTGTGCTCTAAATCTCATTCTGAGGATAGGCTATCAGACTCAACTTCAGATAAATGTTCTTCCCCCTCTGATACGAGTCATGTTGCACTAGAGATGGAAAATTATGTGCAAGATAATTTGAATACATCTGGTGAAAGTCGGGTCATTTCTCTGCATGATGCTTCTGTTGATGTACATCGATCAGATGCTCCAGATTGCCCTGAAAACTGTACTTTGGTTCAGGAAACTGCTCCGACTGATCCTTCTTTGAAAGGAGACCTGGTTGAGCCTGTTTTTGACCGGGAAAGTTGCTTACCCACTCTTGTAAATGGTGATTCATCTGAGCATGACGTGAATCCAGTGGTGAATACTATGTTGCTGTCTAGAGAGGTTGGCAAGAATAATACTAATGAGATTCATAAGGCTGTTCCTTCAAGTGGGTTATCTGAAGAAAATATCACCACCCAGAGTCATGAAAATGCAGATATGTCTGATTCTATACTCAATCATGCTGATGAGAGTTCCTTGCAAATCAGTTCTGGTTTGAATGGTGAAACCATGTGTCAAGAAGGAAATTTACACGTAGGCACAGTTGCTTCAGAAAATATGCGTTCTGATGAAAATCGCATAAATGCATCGAATGATAGTTCTGAGACCGATCAAGAGTAA 3915 0.4135 MERGTRSAGASGVVVTNRNSSGCLIVRKKGDRLGGGYGSSSSSRKQYESKVRKRPSVAKSDSESSDELLMPPVRRLGSETIRVCNGLTAFEQGTGEGSESGRKRDGTERIRHYEDSVFDNNDLEQRETKRNKLDVFDFDEYDDVQMTRMRKSDDDNGISLGARRFVEPMHDASSGIKRECETGSGRHIVYSRKNSYYDRASSLYVEDNANQSRFNANRPDAQLPLSLLKNKFKSDESIRVQGKNGVLKVMVNNKKAGPSEHYGHRKPMESKQSLRTEATAKKNTMVHPSPYSKPKLVQKPGSVVRQEKKRIASKKSFSMKNNKGRAWDSEDSGSLSDQELATTKTRKSLKKVGSEDEQTPLREKLPTTIMKEGKVKRGSGTEKQKLREKIREMLLSAGWTIDYRPRRNRDYLDAVYINPGGTAYWSIIKAYDALQKQLNDGDNEAKPMVNGSSFAHISDEVLSQLTRKTRKKMEQELKKKKIDGSESESDSEKKPNRKRSASDKHDMNSTDSDSDEEKLSSFIRQGSKSMKNKISENVVASASFKSQKSTHRMHDETDNSLSECDPHLSHGRKSRKHGRCTLLVRSSSKGLNSESGGFVPYTGKRTVLSWLIDSRTVALSQKVQYRRRKRVVLEGWIANDGIHCGCCSKILTVSKFEIHAGSKLRQPFQNIYLDSGVSLLQCQIDAWNRQENSEKISYHSVDIDGDDPNDDTCGICGDGGALICCDGCPSTFHQSCLSIKMLPPGEWHCPNCTCKFCAIASGTVKKGDAAACALLTCNLCEKKYHESCAEKMDALSNNSNVSGFSFCGKECKQLFEHLKKFLGAKHELEAGFSWSLIHRTDEDSEATSRGIFQRVECNSKLAVALTIMNECFLPVVDRRSGINLIHNVLYNSGSNFSRLNYNGFYTAILERGDEIISAASIRFHGTRLVEMPFIGTRHIYRRQGMCRRLFSAIESALRSMKVEIMIIPAIAELMQTWTMNFGFTDLEESLRKELRFLNILVFPGINMLQKVLVEKGNFEGNTTASGVEKVENADKVSIKSKLADRSADSSNHQDPDGSANMDSNPVNEIYDECYDASEEIKNQVLSDRTVCSKSHSEDRLSDSTSDKCSSPSDTSHVALEMENYVQDNLNTSGESRVISLHDASVDVHRSDAPDCPENCTLVQETAPTDPSLKGDLVEPVFDRESCLPTLVNGDSSEHDVNPVVNTMLLSREVGKNNTNEIHKAVPSSGLSEENITTQSHENADMSDSILNHADESSLQISSGLNGETMCQEGNLHVGTVASENMRSDENRINASNDSSETDQE 1304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0659 1304 SMART PHD_3 754 812 IPR001965 -
Prci9g0659 1304 SMART PHD_3 712 753 IPR001965 -
Prci9g0659 1304 ProSiteProfiles Zinc finger PHD-type profile. 710 755 IPR019787 -
Prci9g0659 1304 Pfam PHD-finger 713 755 IPR019787 -
Prci9g0659 1304 MobiDBLite consensus disorder prediction 25 73 - -
Prci9g0659 1304 MobiDBLite consensus disorder prediction 255 363 - -
Prci9g0659 1304 MobiDBLite consensus disorder prediction 1094 1114 - -
Prci9g0659 1304 PANTHER PHD FINGER PROTEIN 12 366 1114 IPR042163 GO:0003714|GO:0045892
Prci9g0659 1304 SUPERFAMILY FYVE/PHD zinc finger 702 758 IPR011011 -
Prci9g0659 1304 MobiDBLite consensus disorder prediction 548 570 - -
Prci9g0659 1304 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 893 988 IPR016181 -
Prci9g0659 1304 MobiDBLite consensus disorder prediction 1283 1304 - -
Prci9g0659 1304 MobiDBLite consensus disorder prediction 1040 1066 - -
Prci9g0659 1304 CDD PHD2_CHD_II 713 752 - -
Prci9g0659 1304 MobiDBLite consensus disorder prediction 343 363 - -
Prci9g0659 1304 MobiDBLite consensus disorder prediction 469 522 - -
Prci9g0659 1304 MobiDBLite consensus disorder prediction 89 109 - -
Prci9g0659 1304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 701 801 IPR013083 -
Prci9g0659 1304 MobiDBLite consensus disorder prediction 523 547 - -
Prci9g0659 1304 MobiDBLite consensus disorder prediction 46 61 - -
Prci9g0659 1304 MobiDBLite consensus disorder prediction 258 276 - -
Prci9g0659 1304 Pfam Tify domain binding domain 635 685 IPR032308 -
Prci9g0659 1304 MobiDBLite consensus disorder prediction 469 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0659 Prci-Chr9 21285663 21294484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0659 1 1013 PHD Transcription Factor Family AT4G14920 49.128 0.0 890
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Prci9g0659 TDBD 2.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0659 - - gmx:102666194 1508.81