Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0622 ATGGACACACCAGAGAGGAACCAGATCGGCACCCCCATCGCCAAATTTGAGGATTCACCTGTCTTCAACTTTATCAATAGTCTTTCTCCTATAAAGCCTGTTAAGTCTGTTCACAGCATTCAGACTATCAATTCACTCAGTTTTTCATCTCCTCCATCCGTGTTTACATCACCACATGTCAGCTGTCACAGAGAATCTAGATTTCTCAGGAGGCATAATGTTTTAGATGCATCAAAGCATAAGGTTTTGTCTAAGGATGAGAAAAAAATATATTCAAGTCAAGAGGCTCTTGTAGATTCAACTCATGCATATCATAGCTCGAGTGAGCTGCAAGGAAATGCTGATCAAGGGGTATCCCTGGAAGATTCAACAATTGAACCATCTACTGAGCAATCAGACTTTCCAATTGAGCTACCACAAACCTTAAAATATGATTGTGGTAGCCCAGCTTGTGATCCTCCACCTGGTGGTGATGAGACAAATTCTCTTCTGGATTTGTCGAGTGAGGCAGTATCAGATGTTGCCTTTGTTGATGAAGCCTGTAAAAAAAATTCACCTGAGACTGAAGTGTTACTTCCAGGAACATGTCAAATTGAGCCAAGAATTGGAGGCCCAGAATGTGACTGGGATGGTTTACTTTCAGATGCTACTGATCTATTAATTTTCAACTCTCCAAGTGAAAGAGAAACTTTAAAGTGTCTAATGCAGAAATCATCCGACCCCACAGGAAGGTTTAGCAATTTTATGTCCCAGTTGCCACAAACTACCTTAATTCATGGTGAGAAAATGCAAATTGTTGATCCAGCTGCTTCTGGTTCAGAACATGAAACTGAATATCATCCTTCTCAACCAGGAGAAGTCATTGACAATGATCAGGTGCCAGACAATCTCGCTAACGCTGCTGGGATGGGTGGCAATCATAATAATACATTGAATAATCAGCTTATTTCTATAACACGCCATGGCATACGGAGGCGTTGTCTAGACTTTGAGGTGGTTGGAGGAAGGAGGAAGAACTCCAATGATGGTTCAAATAACAGTAGTTCCAGCATGTTACAATCTGATGAGAGGAATGTTTCTAATGATAAGCAGCTGCTTCCTGCAAAACGCAACGGTAATTCACAGAGGTGCATTTTGCCTGGAATTGGCTTACACTTGAATGCTCTTGCGGCCATAAAAGATTACAAAAGTGTAAAAAATGAAAATATTTCTTCTGGAAGACAAGTCAGTCTGCCAAGCCCTGCCCTGCAACAATCTTCAAGCCAAGAACATTGTCTAGCGTTGGTGCCTGTATCAACAGAAGGAGATTCAGATCTGCCAGACAATGGGGTTCAGCCTGCTGAAGATTGTTCCCAGCCCTCAGGATATGTGGTTGATGAAGATTTCAACCAGAATAGTCCCAAAAAGAAAAGGCGTAAGTTGGAGCCAGCTGGAGATGGCGAGTCCTGTAAGCGTTGTAATTGCAAGAAATCAAAGTGTCTGAAGCTTTATTGTGAGTGCTTCGCTGCTGGTGTCTACTGCATAGAACCTTGCTCTTGCCAGGATTGTTTCAACAAGCCTATTCATGAGGATACTGTTCTTGCAACTCGCAAGCAGATTGAGTCTCGTAATCCTCTAGCCTTTGCTCCTAAAGTCATTCGAAGCTCTGATTCTGTACCTGAAATTGGGGATGATCCCAACAAAACTCCAGCTTCAGCCCGGCACAAAAGAGGATGTAACTGCAAGAAATCAAGCTGCTTAAAGAAATATTGTGAATGTTATCAGGGTGGTGTCGGTTGCTCCATTAGCTGCAGATGTGAAGGATGCAAGAATGCGTATGGTAGAAAGGATGGTTCTGCTCCTATTGGAATAGAAGCTGAACCGGAAGAAGAAACAGAATCATCTGAGAAGGCTGTGGTTGAAAGCACTTTACAAAAATCTGAGATTCAGAACAACGAAGAACATCCAGAGTCAAATCTTCCTACGACACCATTACGTATTTGCAGGCCATTGCTTCCTCTATCATTTTCATCAAAGGGAAAGCCTCCAAGATCTTCTTTCATTACCACCATACCGGCTTCTGGATTATATGCCAACCAAAAACTCAGCAAACCCAGCATTCTCCGGTCTCAACCCAAGTTTGAAAAGCAGTTTAAACCCGTTTCCAACAACGATGAAATGCCCGAGGTTCTCCGTGGTGACGGATCTCCGAGCATCAAGACATCATCTCCCAATGGCAAGAGGATCTCCTCTCCTAACTGTGACTTTGGATCATCTCCAAGTCGCAGAAGTGGCAGGAAGTTGATATTACAATCCATCCCATCATTTCCTTCTCTCACTGCTCCTCACCTTTAG 2334 0.4293 MDTPERNQIGTPIAKFEDSPVFNFINSLSPIKPVKSVHSIQTINSLSFSSPPSVFTSPHVSCHRESRFLRRHNVLDASKHKVLSKDEKKIYSSQEALVDSTHAYHSSSELQGNADQGVSLEDSTIEPSTEQSDFPIELPQTLKYDCGSPACDPPPGGDETNSLLDLSSEAVSDVAFVDEACKKNSPETEVLLPGTCQIEPRIGGPECDWDGLLSDATDLLIFNSPSERETLKCLMQKSSDPTGRFSNFMSQLPQTTLIHGEKMQIVDPAASGSEHETEYHPSQPGEVIDNDQVPDNLANAAGMGGNHNNTLNNQLISITRHGIRRRCLDFEVVGGRRKNSNDGSNNSSSSMLQSDERNVSNDKQLLPAKRNGNSQRCILPGIGLHLNALAAIKDYKSVKNENISSGRQVSLPSPALQQSSSQEHCLALVPVSTEGDSDLPDNGVQPAEDCSQPSGYVVDEDFNQNSPKKKRRKLEPAGDGESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPIHEDTVLATRKQIESRNPLAFAPKVIRSSDSVPEIGDDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNAYGRKDGSAPIGIEAEPEEETESSEKAVVESTLQKSEIQNNEEHPESNLPTTPLRICRPLLPLSFSSKGKPPRSSFITTIPASGLYANQKLSKPSILRSQPKFEKQFKPVSNNDEMPEVLRGDGSPSIKTSSPNGKRISSPNCDFGSSPSRRSGRKLILQSIPSFPSLTAPHL 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0622 777 MobiDBLite consensus disorder prediction 338 360 - -
Prci9g0622 777 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 773 IPR044522 GO:0003700
Prci9g0622 777 MobiDBLite consensus disorder prediction 335 360 - -
Prci9g0622 777 MobiDBLite consensus disorder prediction 703 777 - -
Prci9g0622 777 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 484 519 IPR005172 -
Prci9g0622 777 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 570 605 IPR005172 -
Prci9g0622 777 MobiDBLite consensus disorder prediction 635 657 - -
Prci9g0622 777 MobiDBLite consensus disorder prediction 729 771 - -
Prci9g0622 777 MobiDBLite consensus disorder prediction 435 481 - -
Prci9g0622 777 MobiDBLite consensus disorder prediction 463 481 - -
Prci9g0622 777 ProSiteProfiles CRC domain profile. 482 607 IPR005172 -
Prci9g0622 777 MobiDBLite consensus disorder prediction 102 133 - -
Prci9g0622 777 SMART CXC_2 481 522 IPR033467 -
Prci9g0622 777 SMART CXC_2 567 608 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0622 Prci-Chr9 20965185 20970631 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0622 16 776 CPP Transcription Factor Family AT4G14770 43.150 7.84e-169 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Prci9g0622 TCR 3.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0622 - - gmx:100804447 948.732