Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0621 ATGGCCGTGGGAAAGAACAAGAGAATTTCCAAGGGAAAGAAGGGAGGAAAGAAGAAGGCAGCTGATCCATTTGCCAAGAAGGACTGGTATGATATCAAGGCTCCTTCTGTGTTTCAAGTTAAGAATGTGGGCAAGACCCTCGTCACTCGTACACAGGGTACCAAGATTGCCTCAGAAGGACTGAAGCACAGAGTGTTTGAGGTCTCGTTGGCTGATCTTCAAGGTGATGAGGACCATGCATTCAGGAAGATTAGGTTGAGAGCTGAGGATGTTCAAGGGAAGAATGTTCTCACAAATTTCTGGGGGATGGACTTCACAACTGATAAGTTGAGGTCTTTGGTTCGCAAATGGCAAACTTTGATCGAAGCTCATGTGGACGTAAAGACCACTGACTACACGTTGAGGATGTTTTGCATTGGGTTCACTAAGAGGCGAGCAAACCAGGTGAAGAGGACCTGTTATGCCCAGTCGAGCCAGATCAGACAGATCCGCAGGAAGATGAGGGAGATCATGACTAACCATGCTACCTCCTGTGACTTGAAAGAATTGGTGCGCAAATTCCTCCCTGAGGTGATTGGAAAGGATATTGAGAAGGCAACTTCTAGCATCTATCCTTTGCAAAATGTGTTCATTCGCAAAGTCAAGATCTTGAAGGCTCCTAAGTTTGATCTTGGAAAACTAATGGAGGTTCATGGTGACTATTCGAGGATATTGGTGTGA 720 0.4569 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQGDEDHAFRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMTNHATSCDLKELVRKFLPEVIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSRILV 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0621 239 MobiDBLite consensus disorder prediction 1 15 - -
Prci9g0621 239 MobiDBLite consensus disorder prediction 1 20 - -
Prci9g0621 239 Hamap 40S ribosomal protein S1 [RPS3A]. 1 237 IPR027500 GO:0003735|GO:0005840|GO:0006412
Prci9g0621 239 ProSitePatterns Ribosomal protein S3Ae signature. 61 73 IPR018281 GO:0003735|GO:0005840|GO:0006412
Prci9g0621 239 PANTHER 40S RIBOSOMAL PROTEIN S3A 1 235 - -
Prci9g0621 239 SMART Ribosomal_S3Ae_2 15 220 IPR001593 GO:0003735|GO:0005840|GO:0006412
Prci9g0621 239 Pfam Ribosomal S3Ae family 16 220 IPR001593 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0621 Prci-Chr9 20957035 20959140 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0621 1 235 Cytoplasmic Ribosomal Protein Gene Family AT3G04840 86.441 1.02e-147 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0621 K02984 - gmx:100813273 421.779