Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g0619 ATGGCCGTCGGAAAGAACAAGAGAATTTCCAAGGGAAAGAAGGGAGGAAAGAAGAAGGCAGCTGATCCATTTGCCAAGAAGGACTGGTATGATATCAAGGCTCCTTCTGTGTTTCAAGTTAAGAATGTGGGCAAGACCCTCGTCACTCGTACTCAGGGTACCAAGATTGCCTCAGAAGGACTGAAGCACAGAGTGTTTGAGGTCTCATTGGCTGATCTTCAAGGTGATGAGGACCATGCATTCAGGAAGATTAGGTTGAGAGCTGAGGATGTTCAAGGGAAGAATGTTCTCACAAATTTCTGGGGGATGGACTTCACAACTGATAAGTTGAGGTCTTTGGTTCGCAAATGGCAAACTTTGATCGAAGCTCATGTGGACGTAAAGACCACTGATAACTACACGTTGAGGATGTTTTGCATTGGGTTCACTAAGAGGCGAGCAAACCAGGTGAAGAGGACCTGTTATGCCCAGTCGAGCCAGATCAGACAGATCCGCAGGAAGATGAGGGAGATCATGACTAACCATGCAACATCCTGTGACTTGAAAGAATTGGTCCGCAAATTCCTCCCTGAGGTGATTGGAAAGGATATTGAGAAGGCAACTTCTAGCATCTATCCTCTGCAAAATGTGTTCATTCGCAAAGTCAAGATCTTGAAGGCTCCTAAGTTTGATCTTGGAAAACTAATGGAGGTTCATGGTGACTATTCGGAAGATATTGGTGTGAAGGTAGACAGACCTGCGGATGAGACGATGGCTGAGGCTCCCACCGAAATTGTTGGAGCTTAA 786 0.4593 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQGDEDHAFRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMTNHATSCDLKELVRKFLPEVIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDIGVKVDRPADETMAEAPTEIVGA 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g0619 261 Pfam Ribosomal S3Ae family 16 221 IPR001593 GO:0003735|GO:0005840|GO:0006412
Prci9g0619 261 PANTHER 40S RIBOSOMAL PROTEIN S3A 1 253 - -
Prci9g0619 261 MobiDBLite consensus disorder prediction 1 15 - -
Prci9g0619 261 MobiDBLite consensus disorder prediction 1 20 - -
Prci9g0619 261 ProSitePatterns Ribosomal protein S3Ae signature. 61 73 IPR018281 GO:0003735|GO:0005840|GO:0006412
Prci9g0619 261 Hamap 40S ribosomal protein S1 [RPS3A]. 1 258 IPR027500 GO:0003735|GO:0005840|GO:0006412
Prci9g0619 261 SMART Ribosomal_S3Ae_2 15 221 IPR001593 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g0619 Prci-Chr9 20908001 20910456 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g0619 1 261 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 86.260 2.90e-165 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g0619 K02984 - gmx:100818730 469.159